Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0446 ATGAAGGGCGAAGAGGTGAAAAATGGAGAAGAGAAATTATATTTTGGGGATTGCGATATCGGAAGAACAAGCTTAGTTGTGAGTGATGCGAAAAAGGTACTTGTTGGAGCAGGGGCTCGTGCGCTATTCTATCCCACTCTGCTTTACAATGTTCTTAGAAATAGGTTTCAGGCTGACTTTCGATGGTGGGATAAAGTTGATGAGTTCATATTATTAGGTGCTGTTCCATTTCCTATTGATGTTCCTCGCTTAAAGGAGCTTGGCATTTGTGGAGTCGTCACATTGAATGAGTCATATGAGACTTTGGTTCCAACCACACTATATCATGCTTATGGAATTGATCATTTGGTTATTCCTACTAGAGATTATTGTTTTGCACCGTCATTACGTGACATATGCCGTGCTGTGGACTTCCTACATGAAAATGCATCGTATGGGAGAACTACGTATGTGCACTGCAAAGCTGGGCGTGGTCGCAGCACAACTATTGTTATCTGTTACTTGGTACAGTACAAGATGATGACGCCTGATGCTGCCTATGATTATGTGAAGTCAATTCGACCAAGAGTCCTACTAGCTTCTTCTCAGTGGCAAGCAGTTGAGGAATACTATCAGCTTATGGTGAAGAAGACGATGTTGTATGGTCCCACAGTAGCATCAAAAGATGTTATGGTAAAATTTGACGATGAGGGGTCAGTGGTAGTGACAGAAGCAGATGCGGAAGGGTATGAGGTAGGCATGGAAACAGGATCAGGTGGTGTATGGGGAGATGTAAGTTTGGTGTACCAGGCTGCGCTGGGAAGAATCTCATGGCTCACGCTGCCATATCTCTCACAACTGAAGAAAATGAAACCCAATCATCATTTTTCTTTGGGTAAGCTTAAGTCATATTGA 894 0.4295 MKGEEVKNGEEKLYFGDCDIGRTSLVVSDAKKVLVGAGARALFYPTLLYNVLRNRFQADFRWWDKVDEFILLGAVPFPIDVPRLKELGICGVVTLNESYETLVPTTLYHAYGIDHLVIPTRDYCFAPSLRDICRAVDFLHENASYGRTTYVHCKAGRGRSTTIVICYLVQYKMMTPDAAYDYVKSIRPRVLLASSQWQAVEEYYQLMVKKTMLYGPTVASKDVMVKFDDEGSVVVTEADAEGYEVGMETGSGGVWGDVSLVYQAALGRISWLTLPYLSQLKKMKPNHHFSLGKLKSY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0446 297 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 130 198 IPR000387 GO:0016311|GO:0016791
Alju12g0446 297 CDD PTPMT1 62 205 IPR044596 GO:0004721
Alju12g0446 297 Pfam Dual specificity phosphatase, catalytic domain 87 205 IPR000340 GO:0008138|GO:0016311
Alju12g0446 297 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 55 209 IPR029021 -
Alju12g0446 297 FunFam Dual specificity phosphatase domain protein 62 209 - -
Alju12g0446 297 ProSiteProfiles Dual specificity protein phosphatase domain profile. 62 209 IPR020422 GO:0006470|GO:0008138
Alju12g0446 297 SMART ptp_7 104 215 IPR003595 -
Alju12g0446 297 SMART dsp_5 65 206 IPR020422 GO:0006470|GO:0008138
Alju12g0446 297 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 12 273 - -
Alju12g0446 297 Gene3D Protein tyrosine phosphatase superfamily 62 212 IPR029021 -
Alju12g0446 297 ProSitePatterns Tyrosine specific protein phosphatases active site. 151 161 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0446 Alju-ChrAlju12 5451138 5453771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0446 20 274 Protein tyrosine phosphatase (PTP) family AT2G35680 58.947 3.65e-112 326