Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0441 ATGTCCTATAAATACCCACTTCTTCTTTCCCCTCGAATTTCAACCTTCGAATATTCAATTTCCTTCTTGATCTTTCTCTCTCTTTTTCTTTCTTCTTTGTCTGTGTGTTCTAACACAAGAACCGACGCAGATACCAGTATCTCTCTTGCCGGAGGAAGATATTGCGGTGGTGACGATATGCACGGAGAGGCCGCTTTTGAGTCGGATTTAGCTTTGTTGGAGTCAATTCGACGCCACTTGCTCGGTGACTTTGAGACTGCTTTTGCGGATTCCGATACTTCTTCGGGTTCCGCCCCGGTTTACACTCGGAGCTCCAGTTTCAGTAGCTTGTACCCTTGTTTGACCGACAATTGGGGCGAATTGCCGCTCAAGGAGGACGATTCCGAAGACATGGTGGTCTACGGCGTCCTCCGTGACGCCGTCAGCTTCGGGTGGGTCCCTTCCCTCGATGTCGGGTCGCCCGAGAGCATTTCTTCGAGTTTCGCTCCGACCGTTACAGTGAAATCGGAGCCGGATGTTTTGCCAGTATTGGATTCCCCGGCTGGCCCTCCCGTGGTAAAGCAAGAGAAGGTGGCTGAAGCAGCAGTGCCGGCAGCAGTTCCGTCCAAAGGCAAGCATTACCGAGGAGTAAGACAACGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGACCCGGCGAAGAACGGGGCTAGGGTTTGGCTCGGAACATTCGAGACAGCCGAAGACGCAGCTCTGGCTTACGATCGAGCCGCGTACAGGATGCGAGGCTCACGCGCTTTGCTGAATTTTCCACTGAGAGTGAATTCAGGCGAACCCGATCCGGTGAGAGTGACGTCGAAGAGGTCATCGCCGGAGAGAACGTGCTCGTTGTCGTTGTCGTCGGAGAGCGGGGCGTCGCCGAAGAGGAGGAAGAAGGTGGAGGGGGTTGTGGGGACAGGCCCAAAGGCGACAGGGCAAGTGGGAAGCCAAGTGGGAACGACGCCGTTATTGGTGAGCTAA 999 0.5495 MSYKYPLLLSPRISTFEYSISFLIFLSLFLSSLSVCSNTRTDADTSISLAGGRYCGGDDMHGEAAFESDLALLESIRRHLLGDFETAFADSDTSSGSAPVYTRSSSFSSLYPCLTDNWGELPLKEDDSEDMVVYGVLRDAVSFGWVPSLDVGSPESISSSFAPTVTVKSEPDVLPVLDSPAGPPVVKQEKVAEAAVPAAVPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPERTCSLSLSSESGASPKRRKKVEGVVGTGPKATGQVGSQVGTTPLLVS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0441 332 MobiDBLite consensus disorder prediction 268 332 - -
Alju12g0441 332 ProSiteProfiles AP2/ERF domain profile. 206 264 IPR001471 GO:0003700|GO:0006355
Alju12g0441 332 SUPERFAMILY DNA-binding domain 206 266 IPR016177 GO:0003677
Alju12g0441 332 PRINTS Ethylene responsive element binding protein signature 230 246 IPR001471 GO:0003700|GO:0006355
Alju12g0441 332 PRINTS Ethylene responsive element binding protein signature 207 218 IPR001471 GO:0003700|GO:0006355
Alju12g0441 332 Gene3D AP2/ERF domain 205 267 IPR036955 GO:0003700|GO:0006355
Alju12g0441 332 SMART rav1_2 206 270 IPR001471 GO:0003700|GO:0006355
Alju12g0441 332 CDD AP2 205 264 IPR001471 GO:0003700|GO:0006355
Alju12g0441 332 MobiDBLite consensus disorder prediction 281 297 - -
Alju12g0441 332 Pfam AP2 domain 206 256 IPR001471 GO:0003700|GO:0006355
Alju12g0441 332 FunFam Ethylene-responsive transcription factor 2 205 265 - -
Alju12g0441 332 PANTHER DNA-BINDING DOMAIN 191 296 IPR044808 GO:0003700|GO:0009873
Alju12g0441 332 MobiDBLite consensus disorder prediction 316 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0441 Alju-ChrAlju12 5385273 5386271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0441 67 308 AP2-EREBP Transcription Factor Family AT4G17500 60.870 2.84e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju12g0441 AP2 1.5e-14 CL0081