Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0424 ATGTCCTGCTCGTCGGAGAACTCGGAGGTTTCTGACTTGAAGCCGGTCAAGTCGTCGGAGCAGTCTTCCTTCTCTCAGACTTGTAGCCTCTTGAGTCAGTACCTTAAGGAAAAAGGCAGCTTCGGAGATCTTTGTCTTGGAATGAAATGCAACATCAATCAAAATGGGTCTCCTGAGTCATCTTCTCACTCTGCAACAATGAAGAACCTTCTTCCGACCATGACTCCTGTGAATCCCAGTGTGGTGAATTCTGCGAGCAAGGAGCCTAAATCTGCGCAGTTGACAATTTTTTATGGGGGACAAGTTCTTGTGTTTGATGAATTTCCAGCTGAGAAAGCCAAGGAGATCATGTCCCTTGCAGGCAAAGGAATGTCCCCACAAACTCAGAACAGATATGCTTATACTTTTCCTTCATTTTCTCCTAATCTGGTCACAATTTCTGCTGATTCTAATGCTGCCTGCAATTTGGTTCAAGAACACTCTCAAGCACAACCCAGACCTGTTATTGCTGATCTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAGAGCTCCATATCAAATGAACAATGCCAAGAAGCCAGCTGAAGGCATGCCATGGATGGACTTATCTCCTAATACACCACAAGTCTGA 666 0.4489 MSCSSENSEVSDLKPVKSSEQSSFSQTCSLLSQYLKEKGSFGDLCLGMKCNINQNGSPESSSHSATMKNLLPTMTPVNPSVVNSASKEPKSAQLTIFYGGQVLVFDEFPAEKAKEIMSLAGKGMSPQTQNRYAYTFPSFSPNLVTISADSNAACNLVQEHSQAQPRPVIADLPIARKASLHRFLEKRKDRIAARAPYQMNNAKKPAEGMPWMDLSPNTPQV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0424 221 MobiDBLite consensus disorder prediction 1 21 - -
Alju12g0424 221 MobiDBLite consensus disorder prediction 202 221 - -
Alju12g0424 221 Pfam tify domain 88 121 IPR010399 -
Alju12g0424 221 Pfam Jas motif 173 198 IPR018467 -
Alju12g0424 221 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 204 IPR040390 -
Alju12g0424 221 SMART tify_2 87 122 IPR010399 -
Alju12g0424 221 ProSiteProfiles Tify domain profile. 87 122 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0424 Alju-ChrAlju12 5132957 5134494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0424 1 215 Tify Gene Family AT1G19180 39.062 1.78e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju12g0424 tify 9.3e-20 No_clan