Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0414 ATGAGCTGTTTCTTCTTCAGAAAGAAATCTAATAGCAGAGGAGAGGCAAAATCGGCTCCGGAATTGCAAAATGAGAGGCGGACGAACAACCCGGCGGTGAACCGGGTGTGCAAGTCGACGAGTTCGATACCGTCGCCGAGAAGCCTGACAGAGGTGTACAAAGAGAAAGCCAAGGAGAACGATTTCAGAGTTTTTAGTTTGCAAGAGCTTCTACAAGCTACGAATGGCTTCAATAGGATGCTCAAGATCGGTGAAGGTGGCTTTGGGAGCGTGTATAAAGGTACGATTAGGCCTCCCGGTGGACGAGGCGATCCGCTCGTTGTAGCCATAAAAAAGCTCAACAAGCATGGCTTTCAGGGTCACAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCGTTGTAAATCATCCGAATCTGGTAAAACTTCTGGGATACTGCTCAGTTGATGGCGAAAGAGGGATCCAACGGTTGTTGGTGTACGAGTATATGGCAAATAGAAGCCTAGAACCTCATCTTTTTAATCCTTCTCTTCCCACCTTGCCTTGGAAAACAAGATTGCAGATCATGATCGGTGCTGCACAAGGATTGGCTTATTTACATGAAGGATTGGAATTTCAGGTGATATACCGAGATTTCAAAACTTCAAATGTTCTATTGGATGAGAACTTCCACCCAAAGCTCTCAGACTTTGGTCTTGCGAGGGAAGGCCCTCAAGGCGATAATACTCATGTATCCACTGCGGTGGTTGGAACACAAGGATACGCTGCCCCAGAGTATGTAGACACAGGGCATCTCAAAGTTGAATGTGACATTTACAGTTTTGGAGTGGTACTGTATGAGATCATCACAGGGAGGCGAGCATTAGACAGAAACCGTCCAGCTGCAGAACAAAAACTTCTACATTGGGTTAAACAGTATCCTGCTGACACTGGCAGATTCAGCATGATCATCGACCCGCGTCTCAGAAACAATTTTTCTCCTGGCACAGTTCGCAAAGTTGCTAAGTTGGCCGACGCCTGTACAAGTAAGAACCCTAAAGACAGGCCAACCATGGCTCAGATAGTGGAAAGCTTGAAGGAAGCATTTCAGGTTTCAGAGACCTCTAATACTTCTCAGAGCGCAACTCCCGAATCTTCTCGATCTGCTTTGGCTAGAAGAGATAATGAAATATTAGAGGATTGA 1182 0.4594 MSCFFFRKKSNSRGEAKSAPELQNERRTNNPAVNRVCKSTSSIPSPRSLTEVYKEKAKENDFRVFSLQELLQATNGFNRMLKIGEGGFGSVYKGTIRPPGGRGDPLVVAIKKLNKHGFQGHKEWLAEVQFLGVVNHPNLVKLLGYCSVDGERGIQRLLVYEYMANRSLEPHLFNPSLPTLPWKTRLQIMIGAAQGLAYLHEGLEFQVIYRDFKTSNVLLDENFHPKLSDFGLAREGPQGDNTHVSTAVVGTQGYAAPEYVDTGHLKVECDIYSFGVVLYEIITGRRALDRNRPAAEQKLLHWVKQYPADTGRFSMIIDPRLRNNFSPGTVRKVAKLADACTSKNPKDRPTMAQIVESLKEAFQVSETSNTSQSATPESSRSALARRDNEILED 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0414 393 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 163 373 - -
Alju12g0414 393 MobiDBLite consensus disorder prediction 1 43 - -
Alju12g0414 393 CDD STKc_IRAK 83 360 - -
Alju12g0414 393 MobiDBLite consensus disorder prediction 23 43 - -
Alju12g0414 393 Pfam Protein kinase domain 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0414 393 SUPERFAMILY Protein kinase-like (PK-like) 57 358 IPR011009 -
Alju12g0414 393 ProSitePatterns Protein kinases ATP-binding region signature. 83 112 IPR017441 GO:0005524
Alju12g0414 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Alju12g0414 393 MobiDBLite consensus disorder prediction 363 381 - -
Alju12g0414 393 MobiDBLite consensus disorder prediction 363 393 - -
Alju12g0414 393 Gene3D Phosphorylase Kinase; domain 1 48 162 - -
Alju12g0414 393 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0414 393 Gene3D Transferase(Phosphotransferase) domain 1 163 384 - -
Alju12g0414 393 PANTHER OS01G0588500 PROTEIN-RELATED 33 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0414 Alju-ChrAlju12 5036542 5039028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0414 1 358 Glycoside Hydrolase AT3G07070 42.077 6.17e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju12g0414 Pkinase 2.7e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1892 09 42724381 42726202 Alju12g0414 12 5036542 5039028 CCT