Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0398 ATGTCTCTTTCTGCTGCTTTGTGTTCTCTTCTTCTCACCATCACCTTGCTAATTTTCATGCAAAATCTGGCAATCGACGCTGCGTGTTCCGATTGTTTTGTATCTTCTCGAGCATCCTATTACCCAAACTCCGATGAACATGGAACAGATGTAGGTGCATGTGGGTTTGGTTCCTTTGGTGCTACCGTCAATGGCGGGGACGTCTCAGCTGCTTCTAATCTCTATCGTGATGGTCTCGGCTGTGGTGCCTGTTACCAGGTGAGGTGTACGAACAGTGCTTATTGCTCAGACAAAGGAGCGACAATAGTGATAACGGACTCTGGTTCAGGTCATGACACAGATTTCATTCTTAGCAAACGAGCCTTCTCTCACATGGCTCAGACCAGTGATGCTGCTGACACTTTGTTGGCTTATGGCGTCGTTGATATTCAATACAGAAGAGTTTCATGTAGCTACCCATACAAAAATATCACTATTAAAATACATGAGGCCAGCGGCAACCCTAATTACTTGGCCTTCGTCATAGAGTACCAACAAGGCAAGAGAGATATCACTGCTGTGCAGCTCTGTGAGACGCAGAACTTTGTGTGCAAGTTGCTGAGTAGGAGTTTTGGAGCTGTGTGGACAGTGAACTCTCCTCCAAGTGGACCATTATCAGTGAGGATGTTGTTTAGTGATGAAGATGGAGAAGACACGTGGGTTGTTCCTGTTAATAACATTCCTCAAGATTGGAAAGCTGGAGAAAGCTACGATTCTGGAGTTCAAGTGAACCAATAG 777 0.4543 MSLSAALCSLLLTITLLIFMQNLAIDAACSDCFVSSRASYYPNSDEHGTDVGACGFGSFGATVNGGDVSAASNLYRDGLGCGACYQVRCTNSAYCSDKGATIVITDSGSGHDTDFILSKRAFSHMAQTSDAADTLLAYGVVDIQYRRVSCSYPYKNITIKIHEASGNPNYLAFVIEYQQGKRDITAVQLCETQNFVCKLLSRSFGAVWTVNSPPSGPLSVRMLFSDEDGEDTWVVPVNNIPQDWKAGESYDSGVQVNQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0398 258 Pfam Expansin C-terminal domain 157 237 IPR007117 -
Alju12g0398 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 155 IPR007112 -
Alju12g0398 258 Pfam Lytic transglycolase 71 145 IPR009009 -
Alju12g0398 258 SUPERFAMILY Barwin-like endoglucanases 23 153 IPR036908 -
Alju12g0398 258 PANTHER EXPANSIN-B3 16 255 - -
Alju12g0398 258 Gene3D - 154 256 IPR036749 -
Alju12g0398 258 CDD DPBB_EXLB_N 34 150 - -
Alju12g0398 258 SUPERFAMILY PHL pollen allergen 155 252 IPR036749 -
Alju12g0398 258 Gene3D - 21 151 IPR036908 -
Alju12g0398 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 252 IPR007117 -
Alju12g0398 258 PRINTS Expansin/Lol pI family signature 50 68 IPR007118 GO:0005576
Alju12g0398 258 PRINTS Expansin/Lol pI family signature 138 154 IPR007118 GO:0005576
Alju12g0398 258 PRINTS Expansin/Lol pI family signature 197 211 IPR007118 GO:0005576
Alju12g0398 258 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0398 Alju-ChrAlju12 4793941 4795960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0398 10 254 Expansin Gene Family AT4G17030 41.870 6.59e-63 196