Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0376 ATGTACCTGCGAAGCCAAAACAAGGGAACAACAACTGCACACACATCAAATTTGATGGGACGTGGATTCTCCAAACTCTGTTCATGCTTTGAACCGGTGAACCGGGCGGTGACGACAGCGACGAACCAACCGGACCAGTACGACGGGATTTCTGCTCCGACGGAATCTCTGGACGGAACTCTAGGCCACTCATTCCGATATGTCAGATCTTCAGCTCGCTTGATTTCACCGGCTCACTCGGATCGGTTCGTCTCTCCTCCTTCTCACTCCCTCCGGTTCTCTCTCACCAGAGAATCCGTTATCAGAGCCCGACTCGGTTACCATGAAATCGGGTTCAAGGCCATTTCCGGAGCTTCGATGAGTGCCAACAATTCGACTCCGAAAACTGTTCTCCAACTGCAAAATATGGAAGATGGAGCAAATGATGATACCGTTCATGAAGGTGGCGTGAGGGGAAGTATTGTGGATGGGTTCGAAAGCACGTCGTCGTTTAGAGCTCTGCCGCTTCAGCCGGCGGCGAGAGGGGAAGCTCACTTTCTCTCCGGTCCAATTGAGCGTAGTGCCCTCTCAGAAAGTGGAAGCCACGTCCCTTTTTCGGCTCCTCTGGGCGGATTTTATACTAAAAAGAACCGGAAGACGACGGCGTTTTCGCGGTTGCACGATGCATTCCACCGGGCCATTTCGGAGAAGAAGAAGCAGCCAGGGGTGGTGCCGGAGTTGAATTCCGTGGGCAGAAATGAAGCTCCGTCGAACGACGATAAGCCGGAGATGATGATGAAGAGTGAGAGTAATAATGTGCAGTGGGCGCTTGGGAAAGCAGGGGAGGATCGGGTACATGTGGTTGTATCAGAAGAACACGGCTGGCTGTTCGTCGGGATTTACGACGGCTTCAACGGCCCCGACGCGCCGGAATATCTGATATGCTGTCTTTATCGTGCTGTTTACAATGAACTAAAAGGTTTGTTCTGGGAAGTTGAAGAAACAGAGAAAACTAATCCATCAACTTCAGTATGTTTACAAGACACAAATCCTCAGATGTTTCAAGCGGATGGAAATGAAAGTAGGCGACGCAGGCTATGGGAATTTCTCGAAGAAGACGATAGTGATCATGGTCTTAATTTTTCTGGATCAGAAAGATTCTCATTTTCCATTAGAAAAGCAGGCTCAGCAGTTAGTAAACGGTGGCTATCATCAAAATTGAAACATGGATCATCAAAACATAAAAAGGTGGTCGCAGAAAAAGAGAAGTCTTCTCATGGAGGAAGGAAGAGGAAGGTGGGGCCCGTGGACAATGATTTAGTGTTAAGGGCAATGTCTAGGGCACTTGAAGCCACTGAACTTGCATACTTGGACATGACGGATAAGCTTATTGATTCAAATCCAGAACTTGCTTTAATGGGGTCGTGTGTGTTAGTTGTTATAATGAGGGACGAGGATGTGTACGTGATGAACGTGGGAGATAGCCGAGCCATTGTTGCACAATATAAGCCTATAGAGTTGAATTCTCCTGTTGAGGGATTGTTGTTAGGTAGAGATGAAGGCGAAATCAAGTTGGAGAATGAGGATTCTGGTCAAGAAATGAGGTTAGTTGCATTACAGCTTTCCACCGACCATAGCACCAGCATTGAAGAGGAAGTCATAAGAATTAAGAATGAACATCCTGATGATAGCCAATGCATTGTCAATGGCAGAGTGAAAGGTCGTCTTCTGGTCACCAGAGCATTTGGGGCGGGATTTTTGAAACAGCCAAAGTGGAATGACGCAGTGCTGGAAGTGTTTCGTACAGATTATATTGGGACAGCTCCATATATATGCTGCTCTCCTTCACTATGCCACCATAGATTAAGCCAAAGAGATCAGTTCCTAATCCTCTCATCTGATGGATTATATCAATATCTAACCAAACAAGAAGTGGTTTCTCAAGTTGAGAACTTGATGGAGAAATTTCCAGATGGAGATCCTGCCCTGCATTTGATAGAGGAGCTACTCCTCCGTGCAGCCAATAAAGCTGGAATGGAAGTGCATGAGTTGCTGGATATTCCTCAGGGAGATAGGAGGAAGTACCATGATGATGTTACTGTTATGGTCATTTCACTTGAAGGCAGAATCTGGAAATCATCGCAGCAACGATCTCTGACACCTGAAAAAGCTTGCTTATCTCAGTGA 2166 0.4677 MYLRSQNKGTTTAHTSNLMGRGFSKLCSCFEPVNRAVTTATNQPDQYDGISAPTESLDGTLGHSFRYVRSSARLISPAHSDRFVSPPSHSLRFSLTRESVIRARLGYHEIGFKAISGASMSANNSTPKTVLQLQNMEDGANDDTVHEGGVRGSIVDGFESTSSFRALPLQPAARGEAHFLSGPIERSALSESGSHVPFSAPLGGFYTKKNRKTTAFSRLHDAFHRAISEKKKQPGVVPELNSVGRNEAPSNDDKPEMMMKSESNNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEYLICCLYRAVYNELKGLFWEVEETEKTNPSTSVCLQDTNPQMFQADGNESRRRRLWEFLEEDDSDHGLNFSGSERFSFSIRKAGSAVSKRWLSSKLKHGSSKHKKVVAEKEKSSHGGRKRKVGPVDNDLVLRAMSRALEATELAYLDMTDKLIDSNPELALMGSCVLVVIMRDEDVYVMNVGDSRAIVAQYKPIELNSPVEGLLLGRDEGEIKLENEDSGQEMRLVALQLSTDHSTSIEEEVIRIKNEHPDDSQCIVNGRVKGRLLVTRAFGAGFLKQPKWNDAVLEVFRTDYIGTAPYICCSPSLCHHRLSQRDQFLILSSDGLYQYLTKQEVVSQVENLMEKFPDGDPALHLIEELLLRAANKAGMEVHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSQQRSLTPEKACLSQ 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0376 721 ProSiteProfiles PPM-type phosphatase domain profile. 260 699 IPR001932 -
Alju12g0376 721 SUPERFAMILY PP2C-like 271 700 IPR036457 -
Alju12g0376 721 Gene3D - 242 711 IPR036457 -
Alju12g0376 721 PANTHER PROTEIN PHOSPHATASE 2C 251 698 IPR015655 GO:0004722|GO:0006470
Alju12g0376 721 MobiDBLite consensus disorder prediction 408 425 - -
Alju12g0376 721 SMART PP2C_4 259 697 IPR001932 -
Alju12g0376 721 MobiDBLite consensus disorder prediction 234 257 - -
Alju12g0376 721 FunFam Protein phosphatase 2C 29 337 706 - -
Alju12g0376 721 MobiDBLite consensus disorder prediction 401 425 - -
Alju12g0376 721 CDD PP2Cc 430 699 IPR001932 -
Alju12g0376 721 Pfam Protein phosphatase 2C 389 650 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0376 Alju-ChrAlju12 4572366 4576378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0376 19 707 PP2C-type Phosphatase Gene Family AT2G35350 51.269 0.0 664