Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0374 ATGGGAAGTGCACCATTACCACCAGGTTTTCGTTTTCACCCAACAGACGAAGAACTGGTTGGATATTATCTAAAGCGAAAGGTAGAAGGGCTTGAAATAGAGCTTGAGGTTATCCCAGTCATTGATTTATACAAATTTGATCCATGGGAATTGCCAGGACATAGAAAGACCCTTGTTTTCTATCGCGGAAGAGCTCCGCTTGGAGATCGAACCGAGTGGATCATGCATGAGTATCGACTCAAGAATGACTCTGATCTCTCAACACCTAGTTTTCAGGATGGTTTTGTATTGTGCAGAGTGATGAAGAAGAATGAGAAGGCCAAGAGTTCACAGGAAGAACAAAAGGGTAAGGCAGCAAGAAGAAGTTGCACCAGTGAGAATGAAGAAGCTTCAGTGAAGACTTCTCCATACCATGTGGCTCCAACAATGGCAGAGCCAGAGCAAGCTTCTTCCTTGGAGTCCATCAACCTTTCACATTTTGATGTCTCTCCTGAATTGATTCTAGATTCTACCAAGGAGTACTCTCAAGTACAAGATGCCATGTCCGGGTACTTTACACAGTACGACCTATCATGTTCAAAGCATCCATGGCAACCATTCCTACCATCAGAAAATTCAACCTCCTCATCTTACTCAAATGTAAATGGAGAAATTGAATTTTCTGAAGATCTCAATCAATTTGGCTACTTCTATGGAAATGAGCATGTGTCTCATGAAGAAGGCTTCGATCAAATCAGTTCATTCAGATATCCAAAACCGTTCTGA 765 0.4209 MGSAPLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPGHRKTLVFYRGRAPLGDRTEWIMHEYRLKNDSDLSTPSFQDGFVLCRVMKKNEKAKSSQEEQKGKAARRSCTSENEEASVKTSPYHVAPTMAEPEQASSLESINLSHFDVSPELILDSTKEYSQVQDAMSGYFTQYDLSCSKHPWQPFLPSENSTSSSYSNVNGEIEFSEDLNQFGYFYGNEHVSHEEGFDQISSFRYPKPF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0374 254 MobiDBLite consensus disorder prediction 106 135 - -
Alju12g0374 254 Pfam No apical meristem (NAM) protein 53 80 IPR003441 GO:0003677|GO:0006355
Alju12g0374 254 Pfam No apical meristem (NAM) protein 7 55 IPR003441 GO:0003677|GO:0006355
Alju12g0374 254 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 53 170 - -
Alju12g0374 254 MobiDBLite consensus disorder prediction 106 127 - -
Alju12g0374 254 Gene3D NAC domain 55 109 IPR036093 GO:0003677|GO:0006355
Alju12g0374 254 Gene3D NAC domain 15 54 IPR036093 GO:0003677|GO:0006355
Alju12g0374 254 ProSiteProfiles NAC domain profile. 1 103 IPR003441 GO:0003677|GO:0006355
Alju12g0374 254 SUPERFAMILY NAC domain 3 103 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0374 Alju-ChrAlju12 4562096 4563494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0374 1 187 NAC Transcription Factor Family AT5G46590 41.935 4.17e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju12g0374 NAM 9.1e-14 No_clan