Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0348 ATGAGGCTTCTTCTCTTGCTTCTCCTCCTCCTCCTTTTTCATCATTCCTCCTCTGCCCCTATGTCTGAGTATCGTGCCCTCCTTTCCCTGAAAGCAGCCATTACCGACGACCCCCAATCTTCTCTCTCCTCCTGGAACGCCTCCACCAGTCACTGCACCTGGTCCGGCGTCACCTGTGACTCCCGCCGTCATGTCATTTCTCTTAACTTAACCAGCCTTGACCTCTCCGGCTCACTCTCCAACGATATTGCTCACCTCCCATTCCTCACTAATCTCTCCGTAGCTGACAATCAGCTCTCAGGGCCCACCCCGCCGGGGATTTCTGTCGTCACTGGGCTCCGATTCCTCAACCTTTCTAACAATGTGTTTAACGGAACTTTCCCTGCTCAGCTCTCCGAGCTCAAGAATCTTCAGGTCCTTGACCTTTATAACAACAACATGACCGGAGACCTCCCGCTCGTTGTGACTCAGATGCCGAATCTCCGGCATTTGCATCTTGGAGGGAACTTCTTCGGGGGTCAGATCCCGCCGGAGTACGGACGGTGGGAACACTTGGAGTATTTGGCTGTTTCTGGTAATGAACTAGCCGGCAAAATACCGCCGGAGATCGGAAACTTGACGAAGCTCCAAGAGCTTTACATTGGATATTACAACGCTTACGAGGGCGGTTTACCTCCAGAGATTGGCAACTTGTCGGAATTAGTCAGGTTCGATGCCGCGAACTGTGGATTAACAGGCGAGATTCCTCCGGAAATTGGGAAGCTCCAGAAACTCGATACACTGTTTCTTCAAGTGAATGCGCTCTCAGGGCCTCTGACACCCGAGCTTGGGAGCTTGAAGAGTTTAAAATCAATGGATTTGTCCAACAATATGCTAGCGGGTGAGATTCCGGAGAGTTTTGCCGAGCTTAAGAACCTGACTCTTTTGAACCTGTTCAGAAACAAGCTTCACGGAGCTATTCCTGAATTCATTGGGGAACTACCATCCTTGGAGGTATTACAGCTTTGGGAGAATAACTTCACTGGGAGCATTCCTCCGGGTTTGGGGCAGAATGGGAGGCTTGTTCTTGTTGATCTTTCATCAAACAAAATAACCGGTTCTTTGCCTCCTGACATGTGCAATGGGAATCGTCTTCAGACTCTAATAACTCTTGGAAATTTCTTGTTTGGTCCTATCCCTGAATCACTTGGGAAATGCGAGGCCTTAACACGAATTCGTATGGGAGAGAACTATTTGAATGGTTCAATTCCTAAAGGCCTCTTTGGGCTTCCCAAACTTACACAGGTTGAACTTCAGGACAATATTCTCTCAGGGCATTTTCCTGAGGGTGCTTTCTTTTCTGTTAATCTTGGTCAGATTAGTCTATCCAACAACAAGCTTTCTGGGCCTTTGCCACCTTCTATAGGTAACTTTTCCGGCATGCAAAAGCTCCTTCTGGACGGTAACAAATTCTCAGGTCAAATACCTCCTCAGATTGGGAGATTACAGCAGCTTTCCAAGGTAGATTTTAGCCACAACAAGTTCTCGGGCTCAATCACCCCAGAGATCAGTAAATGCAAGTTACTGACATTCGTTGATCTTAGCCGTAACGAGCTTTCTGGTGAGATTCCAAACGAGTTAACTGGTATGCGGATTCTCAATTACTTGAATCTCTCTAGAAATCACCTTGTTGGCAGCATTCCCTCGTCGATATCAAGCATGCAAAGTTTAACCTCTGTTGATTTTTCATATAACAATCTCTCTGGTTTGGTTCCTGGCACTGGCCAATTCAGTTACTTCAACTACACATCTTTCCTTGGCAACCCTGAACTCTGTGGTCCTTATTTGGGTCATTGCAAGGACGGTGTTGCTAATGGTGCTCATCCACCTCATGTTAAAGGTCCATTGTCTTCTTCCTTGAAACTTCTCCTGGTTCTTGGGTTGCTATTATGCTCGATTGCATTTGCAGTTGCAGCAATAATTAAAGCTCGATCATTGAAGAAGGCAAGTGAAGCTCGTGCATGGAAGTTAACAGCATTTCAGCGCTTGGACTTCACTGTGGATGATGTTTTGGATTGCTTGAAGGAGGACAATATTATTGGGAAAGGTGGAGCAGGAATTGTGTACAAGGGTGCTATGCCTAATGGTGATCATGTTGCTGTGAAAAGGTTGCCGGCCATGAGCAGAGGATCTTCTCATGATCATGGTTTCAATGCAGAGATCCAGACATTGGGGAGGATACGACACAGACACATTGTTAGGTTGTTGGGTTTCTGTTCAAACCATGAAACCAATCTTTTGGTGTATGAATACATGCCCAATGGAAGCCTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGTCATTTGCATTGGGACACAAGGTATAAAATTGCTGTGGAGGCTGCGAAGGGGCTGTGTTATCTACACCATGACTGTTCCCCTCTTATTGTTCATCGAGATGTGAAGTCCAACAATATCCTTCTTGACTCCAACTTCGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTGCAAGATTCTGGAACATCTGAATGCATGTCCGCCATTGCTGGTTCATATGGATACATAGCACCAGAATACGCCTACACACTGAAAGTTGATGAGAAGAGCGATGTGTACAGCTTTGGAGTTGTTCTTCTAGAGCTTATAACAGGGAGGAAACCAGTTGGGGAATTTGGTGATGGTGTGGACATAGTACAATGGGTGAGAAAGATGACTGACTCAAACAAGGAAGGAGTTCTGAAAGTTCTTGATCCAAGACTTCCCTCAGTTCCTCTTCATGAGGTGATGCATGTGTTCTATGTGGCAATGCTGTGTGTTGAAGAACAAGCAGTAGAGAGACCAACCATGCGTGAAGTTGTTCAAATTCTAACAGAGCTTCCAAAGCCACCTACTTCTAAACAAGGAGGAGACTTGGCAATCACAGAGTCATCCCTGTCTTCATCAAACCCTCTGGATTCTCCCAAAACAGAACTGAAAGATCATCAGCAGCATCCTCCTCAATCGCCACCACCAGATCTTCTTAGCATCTGA 3036 0.4625 MRLLLLLLLLLLFHHSSSAPMSEYRALLSLKAAITDDPQSSLSSWNASTSHCTWSGVTCDSRRHVISLNLTSLDLSGSLSNDIAHLPFLTNLSVADNQLSGPTPPGISVVTGLRFLNLSNNVFNGTFPAQLSELKNLQVLDLYNNNMTGDLPLVVTQMPNLRHLHLGGNFFGGQIPPEYGRWEHLEYLAVSGNELAGKIPPEIGNLTKLQELYIGYYNAYEGGLPPEIGNLSELVRFDAANCGLTGEIPPEIGKLQKLDTLFLQVNALSGPLTPELGSLKSLKSMDLSNNMLAGEIPESFAELKNLTLLNLFRNKLHGAIPEFIGELPSLEVLQLWENNFTGSIPPGLGQNGRLVLVDLSSNKITGSLPPDMCNGNRLQTLITLGNFLFGPIPESLGKCEALTRIRMGENYLNGSIPKGLFGLPKLTQVELQDNILSGHFPEGAFFSVNLGQISLSNNKLSGPLPPSIGNFSGMQKLLLDGNKFSGQIPPQIGRLQQLSKVDFSHNKFSGSITPEISKCKLLTFVDLSRNELSGEIPNELTGMRILNYLNLSRNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGHCKDGVANGAHPPHVKGPLSSSLKLLLVLGLLLCSIAFAVAAIIKARSLKKASEARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPNGDHVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPTSKQGGDLAITESSLSSSNPLDSPKTELKDHQQHPPQSPPPDLLSI 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0348 1011 SUPERFAMILY RNI-like 67 388 - -
Alju12g0348 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 17 79 - -
Alju12g0348 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 616 - -
Alju12g0348 1011 MobiDBLite consensus disorder prediction 971 988 - -
Alju12g0348 1011 SUPERFAMILY L domain-like 296 612 - -
Alju12g0348 1011 MobiDBLite consensus disorder prediction 962 1011 - -
Alju12g0348 1011 Pfam Leucine Rich repeats (2 copies) 135 169 IPR025875 -
Alju12g0348 1011 Gene3D Ribonuclease Inhibitor 218 323 IPR032675 -
Alju12g0348 1011 Gene3D Phosphorylase Kinase; domain 1 652 764 - -
Alju12g0348 1011 ProSiteProfiles Protein kinase domain profile. 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0348 1011 SMART serkin_6 687 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0348 1011 Gene3D Ribonuclease Inhibitor 130 217 IPR032675 -
Alju12g0348 1011 Gene3D Ribonuclease Inhibitor 22 129 IPR032675 -
Alju12g0348 1011 Gene3D Ribonuclease Inhibitor 325 618 IPR032675 -
Alju12g0348 1011 Gene3D Transferase(Phosphotransferase) domain 1 765 973 - -
Alju12g0348 1011 Pfam Protein tyrosine and serine/threonine kinase 689 958 IPR001245 GO:0004672|GO:0006468
Alju12g0348 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Alju12g0348 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 974 - -
Alju12g0348 1011 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 184 953 - -
Alju12g0348 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 80 323 - -
Alju12g0348 1011 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Alju12g0348 1011 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 764 - -
Alju12g0348 1011 SUPERFAMILY Protein kinase-like (PK-like) 680 958 IPR011009 -
Alju12g0348 1011 SMART LRR_typ_2 279 302 IPR003591 -
Alju12g0348 1011 SMART LRR_typ_2 134 157 IPR003591 -
Alju12g0348 1011 SMART LRR_typ_2 423 447 IPR003591 -
Alju12g0348 1011 SMART LRR_typ_2 567 590 IPR003591 -
Alju12g0348 1011 SMART LRR_typ_2 158 182 IPR003591 -
Alju12g0348 1011 SMART LRR_typ_2 327 351 IPR003591 -
Alju12g0348 1011 SMART LRR_typ_2 495 519 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0348 Alju-ChrAlju12 4242828 4246301 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0348 16 1011 Receptor kinase-like Gene Family AT5G65700 81.618 0.0 1630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju12g0348 PK_Tyr_Ser-Thr 1.9e-46 CL0016