Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0345 ATGTTCACCTGCTCAATTCCTCGTAATGTGAATTCCTGGACTGAATTGACCCTATTTAACTTGTCATATAATCGATTATCCGGTACGATTCCGCCAGAGCTTGGTAATTTTCCATATTTGAGTTCTCTTGATCTTGCCATGAATTTCCTGACCGGCAGAATTCCACCGGAGTTAGCTAAGCTTAAGCTCAGCCAGTTCAACGTGTCGGGAAACAAATTGTCTGGAAACGTACCTTCAGGGTTCAATAATGAATTCTATTTGGCGGGTCCGATCGATAATTCAAACCTCTGCAGCGAAGTCATGATATCCCTCCATCCTTGTTCCGAATCTAAGTACTTCTCTTCGGTAGCTATGATTGTGTTATCTACCTTCATTGTACTCCTTCTGAGACCTCGGGTTGCAGATTTTGGATTGGCTAAGACCTTGCAGCCAAAGGCAAACGAAGATGGTGGTAGTGCTACATCCAAGGTCGCTAGGTCCTATGGTTACAAATTGCTCCAGGTTGTAGAATATGCTTACACACTTAAAGTTAATGAGGAAAGTGATGTGCATAGCTATGGAGTACTACTGACGGAATTGGTCACAGGCAAAAGGCCAAATGACCCATCCTTTGGTGAGAACAGGGATATAGTGAAGTAG 639 0.4335 MFTCSIPRNVNSWTELTLFNLSYNRLSGTIPPELGNFPYLSSLDLAMNFLTGRIPPELAKLKLSQFNVSGNKLSGNVPSGFNNEFYLAGPIDNSNLCSEVMISLHPCSESKYFSSVAMIVLSTFIVLLLRPRVADFGLAKTLQPKANEDGGSATSKVARSYGYKLLQVVEYAYTLKVNEESDVHSYGVLLTELVTGKRPNDPSFGENRDIVK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0345 212 Gene3D Transferase(Phosphotransferase) domain 1 124 210 - -
Alju12g0345 212 Gene3D Ribonuclease Inhibitor 1 113 IPR032675 -
Alju12g0345 212 SUPERFAMILY L domain-like 5 83 - -
Alju12g0345 212 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 82 - -
Alju12g0345 212 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0345 212 Pfam Protein tyrosine and serine/threonine kinase 132 200 IPR001245 GO:0004672|GO:0006468
Alju12g0345 212 SUPERFAMILY Protein kinase-like (PK-like) 130 201 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0345 Alju-ChrAlju12 4195335 4196597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0345 6 83 Receptor kinase-like Gene Family AT5G65710 37.975 5.80e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju12g0345 PK_Tyr_Ser-Thr 1.8e-06 CL0016