Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0326 ATGCCTTCAAGGAGGAATGGACAATCCAGCAGAAGATGGTACCGTCGCATTTGTTGGGTCAGCAGTGCTGATAGTTCAGACTCGTCGGAATCTGAAACCTATGAACCCCCTCCTCCGATTGATATAGGCGAACATCACCCTTTTCCGTTGCAGGCGGCGGCGACGTATGATTGGCAACTCCACCCGCCGCCGCCGCCGCCGTCGTTCATCCTGGACGAGCTCCCGCAACGTGTTCGGCGAATCCATGTATATGTAACTGAAATCGCGAGAGTTGAAGATGATCATCGTGAAGTAATTAGGAATATGGAAATAACGGAGGCGATTACAAGAGAGAAAACCATATGTCCTATTTGCAAGGAGGAGTTCAAATTGGGAGAAATTGCAGGCAAATTACCTTGCGACCATTTCTTTTGCTCTGAATGTGTTAATGGTTGGATCAATTTCAACCAAAACAATACTTGCCCTGTTTGTCGCTGTCGATTGCCTGCAGTCCCACCACCACCTTGCACCTGGGAGGAATATTACTTCCCTCCTATGCCCATTTATACTGAATCACCGCCACTTGTCGGTGTTGAAACAGAGTCGTCTCCTTCTCCATCGATGAGCAATAGTGAAGCTGGTTATGACACTGCACGTGACGAGCTTGATGCATCTCATGCTCATCCACAAGATTCTCTTGCTTCTTCTACTACACCTACCGCTGCACAAGCAAGGTCGAAGAGCGAGACACTAACTTCAAAATCTGCGATGGCAATGGTGGCGTTGGATGCAGCTCTTGGACCGGAAGTGGTGATGGATGTGTGCGAACCGGGTCGAGTTAAGGGTGTCGTTAGGATGGAGAAGAGAACCGAAGCAGCCGGATGCTCTGTTCTTCGTCCTCTTTGA 885 0.4927 MPSRRNGQSSRRWYRRICWVSSADSSDSSESETYEPPPPIDIGEHHPFPLQAAATYDWQLHPPPPPPSFILDELPQRVRRIHVYVTEIARVEDDHREVIRNMEITEAITREKTICPICKEEFKLGEIAGKLPCDHFFCSECVNGWINFNQNNTCPVCRCRLPAVPPPPCTWEEYYFPPMPIYTESPPLVGVETESSPSPSMSNSEAGYDTARDELDASHAHPQDSLASSTTPTAAQARSKSETLTSKSAMAMVALDAALGPEVVMDVCEPGRVKGVVRMEKRTEAAGCSVLRPL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0326 294 ProSitePatterns Zinc finger RING-type signature. 133 142 IPR017907 -
Alju12g0326 294 SMART ring_2 115 157 IPR001841 -
Alju12g0326 294 MobiDBLite consensus disorder prediction 189 207 - -
Alju12g0326 294 MobiDBLite consensus disorder prediction 21 46 - -
Alju12g0326 294 SUPERFAMILY RING/U-box 102 164 - -
Alju12g0326 294 MobiDBLite consensus disorder prediction 222 245 - -
Alju12g0326 294 ProSiteProfiles Zinc finger RING-type profile. 115 158 IPR001841 -
Alju12g0326 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 165 IPR013083 -
Alju12g0326 294 Pfam Ring finger domain 114 158 IPR001841 -
Alju12g0326 294 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 51 162 - -
Alju12g0326 294 MobiDBLite consensus disorder prediction 187 245 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0326 97 158 C3H Transcription Factor Family AT1G68180 41.935 5.06e-11 59.7