Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0317 ATGTACTGGGAATCTGGGAGGTACATTGTTTTGTCCATTAATTATGATAACTACACAATTCGAGTGAGGGATGCTAATATTGTGGAGTCAGATACATCTTCCCTTCCTGAGTATTCTTTAACACACTACAACTTTAGCCACAGAGGCCCATCTACCTCCTGGTATAGACTGAACACAAATACTGTGATATATGTAAGGTGTGAACACCCTGTGAATTCCCCTCAGTTTGTGGACACAGCCCCTTGCTTCAACATTTCAAATGCCTCTGTAGCTTCTTCTTCTTCTTCATCGTCGTCTTCGTATTCGTATGCCTATGTTGGCAGCGGATATTTAAACGATGTGGGATTAGAGGACGGTTGTCGTATAGAAATGATTTATATGACATCGTGGCCTGCTCTGAAGAACAACCAGAACCAGTCTGCTTGGTCATGCACAGACATCCACAACATGCTTCTTCATTGCTTTGAGCTTTCTTGGATCAACCCAGTAATTGCAGAATACAGCGGCATTCTTGTGAGTACCCTGAATAAGGCTGAAGCCAATGGTCAGGATTTCATCAATGAAGTTGCTACACTTGGTAGAATCCACCATGTTAATGTTGTGCATCTCATCGGTTATTGTGTGGAAGGATCGAAGCGCGCTCTTATTTATGAATTAATGCAAAATGGATCTCTTGACAAATACATTCTCTCTAAACATGTTGACGATGAGCAATCCTTGAATCTTCACCAATTGTATACTATTTCCCTTGGAGTAGCTCGTGGTATTGAATATCTTCACAAAGGATGTGAAATGCAAATTCTGCTTTTTGATATAAAGCCACCCAACATCCTTCTCGATGACAACTTCATCCCAAATTCTGATTTTGGCCTTGCTAAACTCTATCTTACGAATGATAGCATTGTGTCTCTTACCGCAACAAGGGAAACAATACGATACATGGCTTTCGAGCTCTTCTACAAGAATGTTGTGGAAATGCTTGAGGGCGATGACCAAGACTTGGAATTGCCTTATCAAAAGCCTTCTTTTTATGTGGAAGATTTACCTGAAGTTGACGATAATAATCATTCAAGTTCAATGATCACGTCATCTAAGCTTGGAGAACGTTCTTCAATTGACCAAATTGTAGAGATGCTTGAAGAAGAGGAGCTAGAGTTAGTATTGCCTCAAAAGCCTTGA 1179 0.4054 MYWESGRYIVLSINYDNYTIRVRDANIVESDTSSLPEYSLTHYNFSHRGPSTSWYRLNTNTVIYVRCEHPVNSPQFVDTAPCFNISNASVASSSSSSSSSYSYAYVGSGYLNDVGLEDGCRIEMIYMTSWPALKNNQNQSAWSCTDIHNMLLHCFELSWINPVIAEYSGILVSTLNKAEANGQDFINEVATLGRIHHVNVVHLIGYCVEGSKRALIYELMQNGSLDKYILSKHVDDEQSLNLHQLYTISLGVARGIEYLHKGCEMQILLFDIKPPNILLDDNFIPNSDFGLAKLYLTNDSIVSLTATRETIRYMAFELFYKNVVEMLEGDDQDLELPYQKPSFYVEDLPEVDDNNHSSSMITSSKLGERSSIDQIVEMLEEEELELVLPQKP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0317 392 Pfam Protein tyrosine and serine/threonine kinase 175 323 IPR001245 GO:0004672|GO:0006468
Alju12g0317 392 ProSiteProfiles Protein kinase domain profile. 100 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0317 392 Gene3D Transferase(Phosphotransferase) domain 1 224 333 - -
Alju12g0317 392 SUPERFAMILY Protein kinase-like (PK-like) 182 322 IPR011009 -
Alju12g0317 392 PANTHER RUST RESISTANCE KINASE LR10-RELATED 172 325 IPR045874 GO:0004672
Alju12g0317 392 SMART serkin_6 167 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0317 392 Gene3D Phosphorylase Kinase; domain 1 163 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0317 Alju-ChrAlju12 3893036 3895983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0317 170 321 Receptor kinase-like Gene Family AT1G66910 54.902 2.77e-48 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju12g0317 PK_Tyr_Ser-Thr 1.3e-23 CL0016