Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0316 ATGTATTTCTCTTCAGGAAAATTACTGGTGCCTCTGTTTCTGTTAACAGTGTTTTACATAACTAGCAAAGCACTCGATGTACACCAGAACTGTTCTAGGTTTTGCGGAGACCACAACGTTAGCAGCCCTTTTCGGCTAAAAGACTCTCCAAAGGAGTGTGGTGACCCCAAATACAACCTATCTTGTGAGCAGAACCAATTGGTAATGTACTGGGAATCTGGGAGGTACAGTGTTATGTCCATTAATTATGAGAACTACAGAATTCGAGTGAGGGATTCTAATATAGTGGAGTCAGACTCATCTTCCCTTCCTCAGTATTCTTTAACAGACTACAACTTTAGCCGAAGGGATCCATATAACACCTGGTATGTAAGTAACACATATATGATATATGTAAGGTGTGAACACCCTGTGGATTCCCCCAAGTCTCTAGACACAGCCCCTTGCTTCAACACTTCAAATGCCTCTGCATTTTCTTCTTCTTCTTCTTCATATGCCTATATTGGCAGCGGATATGTAGGGGATGTGGGGTTAGAAGATGATTGTCTTATAGAGATGATGTATATGACTTCGTGGCCTGCTCTGAATAACAACCCGAACCAGTCTGCTTGGTCATGCACAGACATTCACAATATGCTTCTTTATGGCTTTGAGCTTTCTTGGAGGCGGTCTCACTCTGCTGGGTACTCTCCTAACGTATATGATATTAATCTGCAGGCTGTTAGACATTTATCAATGTATGAGAGCATTGAAGATTTTCTGCAGAGCGACAACAACATCATGCCTATAAGGTACTCTTATAGAGATATCAAGAAGATGACCAAAAGTTTTAAAGTAAGACTTGGGAAAGGAGGCTATGGCTCTGTTTTTAGAGGACACCTTCGAAGTGGCCGTGATGTGGCTGTCAAGATGTTGGATAATGCTAAAGCCAATGGTCAGGATTTCATCAATGAAGTTGCTACACTTGGTAGAATTCATCATGTTAATGTGGTCCAACTCATCGGGTACTGTGTGGAAGGAACAAAGCGTGCTCTTATATATGAATTCATGCAAAATGGATCTCTTGACAAATACATTCTCTCTAAACATGTTGATAATGAACAATCCTTGAATCTTCACCAATTGTATACCATTTCTCTTGGAGTAGCTCATGGTATTGAATATCTTCACAAAGGGTGTGATATGCAAATTCTGCATTTTGATATAAAGCCGCATAACATCCTTTTGGATGACAATTTCATCCCAAAAGTTTCTGATTTTGGCCTTGCTAAACTCTATCCTATAAATGATAGCATTGTGTCTCTTACCGCAGCAAGGGGAACAATAGGATACATGGCTCCCGAGCTCTTCTACAAGAATGTAGGCGTAGTATCTTATAAAGCTGATATCTATAGCTTTGGGATGTTACTAATGGAGATGGCTGGTAGAAGGAAGAACTTGAATGTGTTGGCTGAGCAATCAAGTCAATTTTATTTTCCTTTTTGGGCTTATGATCAATTAAATGAAGGAAATGAAATTAGCATAGCAGATGCAACAGATGAAGAGATGAAAGTGGCAAGGAAAATGATGATCGTTGCGTTGTGGTGCATTCAAACCAAGCCTAGTGATCGTCCTTCAATGAACAAAGTTGTGGAGATGCTTGTAGGAGATGAGCAAGACTTAGAATTGCCTCGAAAGCCTTATCTATATCCACAAGATTTACCAGCAATAGATGATAATAATCATTCAACTTCAAGACAGCAATCCAAGTCAAGCAGTCATTCTTCAACGAACAAAGATGTAGAGATGCTTGAAGGAGAAGAACAAGAGTCAGTATTGCCTCACAAGCCTTTTCTATGCACACAAGATTCACCAACAACTAATGTTAGTGATTATTTATGTTCAACGCCTCCATCATCCTCTGATCCTTCGGTGAATAATCCTAAAGAAACAACCTCATTTTTAACTAAACAAGATGAGAGATCAATATAA 1971 0.3952 MYFSSGKLLVPLFLLTVFYITSKALDVHQNCSRFCGDHNVSSPFRLKDSPKECGDPKYNLSCEQNQLVMYWESGRYSVMSINYENYRIRVRDSNIVESDSSSLPQYSLTDYNFSRRDPYNTWYVSNTYMIYVRCEHPVDSPKSLDTAPCFNTSNASAFSSSSSSYAYIGSGYVGDVGLEDDCLIEMMYMTSWPALNNNPNQSAWSCTDIHNMLLYGFELSWRRSHSAGYSPNVYDINLQAVRHLSMYESIEDFLQSDNNIMPIRYSYRDIKKMTKSFKVRLGKGGYGSVFRGHLRSGRDVAVKMLDNAKANGQDFINEVATLGRIHHVNVVQLIGYCVEGTKRALIYEFMQNGSLDKYILSKHVDNEQSLNLHQLYTISLGVAHGIEYLHKGCDMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPINDSIVSLTAARGTIGYMAPELFYKNVGVVSYKADIYSFGMLLMEMAGRRKNLNVLAEQSSQFYFPFWAYDQLNEGNEISIADATDEEMKVARKMMIVALWCIQTKPSDRPSMNKVVEMLVGDEQDLELPRKPYLYPQDLPAIDDNNHSTSRQQSKSSSHSSTNKDVEMLEGEEQESVLPHKPFLCTQDSPTTNVSDYLCSTPPSSSDPSVNNPKETTSFLTKQDERSI 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0316 656 MobiDBLite consensus disorder prediction 562 656 - -
Alju12g0316 656 MobiDBLite consensus disorder prediction 570 592 - -
Alju12g0316 656 Pfam Wall-associated receptor kinase galacturonan-binding 31 92 IPR025287 GO:0030247
Alju12g0316 656 FunFam serine/threonine-protein kinase PBS1-like 245 349 - -
Alju12g0316 656 Gene3D Phosphorylase Kinase; domain 1 251 349 - -
Alju12g0316 656 Gene3D Transferase(Phosphotransferase) domain 1 350 557 - -
Alju12g0316 656 SUPERFAMILY Protein kinase-like (PK-like) 256 548 IPR011009 -
Alju12g0316 656 ProSitePatterns Protein kinases ATP-binding region signature. 281 303 IPR017441 GO:0005524
Alju12g0316 656 PANTHER RUST RESISTANCE KINASE LR10-RELATED 247 576 IPR045874 GO:0004672
Alju12g0316 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Alju12g0316 656 ProSiteProfiles Protein kinase domain profile. 275 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0316 656 SMART serkin_6 275 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0316 656 MobiDBLite consensus disorder prediction 613 646 - -
Alju12g0316 656 FunFam PR5-like receptor kinase 350 558 - -
Alju12g0316 656 Pfam Protein tyrosine and serine/threonine kinase 278 547 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0316 Alju-ChrAlju12 3886085 3889581 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0316 255 577 Receptor kinase-like Gene Family AT1G66910 50.610 1.34e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju12g0316 PK_Tyr_Ser-Thr 3.6e-47 CL0016