LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju12g0312	ATGGAAACTCCACCTGCAAAATCCTTCTTCTTCACTTGCTTGTTGCTAATAGCTGGGTTTTCATCAGAATGTGTAGGAAGCCGGAGTAGCTGTCCAGAACCTGAAACAAGATGTGGAAACCATCGTGTTCGATTTCCTTTCCGAATAATAGGACGACAACCAGAAGAGTGTGGTTATCCTGGGTTTGGCTTACAATGTTCCTCTACCAATCACCCTGTTCTTGAGCTACCTCGCTCAGTGAAGCTCAATGTCAAACACATCGATTACAGTTCTCAAACCGTTCAGCTATATGATCCTTATGGCTGCCTCTCTCTGCATCTCCCTAACCTCATCACTCTTCCTTCTCCTTCCCCTTTCCAGCTCAAAGCCAGTTCGTCATATTTTGATCTTGATGATGACTTTACCGTCTTCAATTGCTCGCAGCCGAAAAGCTCCAATGAGGGTGTGAAATTAATCTCATCGTGCCTCAGCAGCTCTTCCTATCACGTATATGCCATTTCATCAAGTGCACCCATCAGACAAATTCCCTTGTTGTCTTGCACCAAAGTATTTAACATTTCATCCGTCCCTGCAAAGATTTTTAGAGCTGATTACCATCTTCATTTGAAATGGTCTAATCCCATGTGTAAACGTTGCGAATCAACCGGAAGAAGATGCGGATTCAGGAATAGCAGCATTAGTTTGGAAACTGCATGCTTTGAAATAGGTTCATCGAACAAATTTTTAACCACAGGATTAATAGTGGGCTCATTTCTTCTGGCAGCAATTATTGTTGCCATTCATTACATCTTCAATTCTTACAAATCACAGAAAGAAAGCCAGGAAATAATTGACAAATTTTTGAAAGATTATACAGAACTTAGGCCTACCAGGTATTCATATGCTGAAATTAAGAGAATTACCAATCAATTTAAAGACAAGTTGGGGGAAGGATCGTTTGGTACTGTGTTCAAAGGAAAAATTTCATCTGAATTCCAAGTTGCAGTCAAAATTCTTTCTAATTCATTATTAGGAAATGGTGAAGAGTTCATCACTGAAGTCGGAACATTAGCCAAAATCCATCATGTCAATATTATTCGCTTAATTGGCTTCTGTGCAGATAGCTTTAGAAGAGCACTTGTTTATGAGTACTTACCAAATGGTTCATCACAAAATTTCATAAATTCACTTGGTCAAAGGCAGAACTTTCCTGGCTGGAAAAAGTTACAAGAAATTGCTTTAGGCATAGCGAAAGGAATTGAATACCTTCATCATGGGTGTGAGAAGCGTATACTTCATTTTGACATAAAACCTTACAATGTTTTATTAGATAGTGATTTTACTCCAAAAATATCTGATTTTGGGCTGGCCAAATTATGTTCCAAAAATCAAAGTATTGTATCAATGACTAATGCTAGAGGAACTTTTGGCTATATGGCTCCTGAAGTATTCTCTAGAAACTTTGGTAATGTGTCTCACAAAGCAGATGTTTATAGTTTTGGGATGTTGCTGCTCGAAATGATAGGGGGGAGAAAGATCACCAATGACGCAGAAGAAGATGCAGCCCACATTTACTATCCGGAATGGATCTATAATGTTTTAGAAGGGAGAGAGGATATAAGAATTCATATTGAGGAAGAAGAGGATGCTATGAGTGCCAAAAGATTAGGAATAGTGGGACTGTGGTGCATCCAATGGCATGCTGTGGACCGACCTTCAATGCAAGTGGTGGTTCAAATGTTGGAACGACAAGAACACAAATTACCAATACCTCCTAATCCTTTTCACTCTGAAGGTCCTTCCACAAGTAACAGAGCCAGTGTGCCTGCTAGACATGTGATGCAAGGTTTAGAAATAATCCATGAAGGAAAGTGA	1854	0.3948	METPPAKSFFFTCLLLIAGFSSECVGSRSSCPEPETRCGNHRVRFPFRIIGRQPEECGYPGFGLQCSSTNHPVLELPRSVKLNVKHIDYSSQTVQLYDPYGCLSLHLPNLITLPSPSPFQLKASSSYFDLDDDFTVFNCSQPKSSNEGVKLISSCLSSSSYHVYAISSSAPIRQIPLLSCTKVFNISSVPAKIFRADYHLHLKWSNPMCKRCESTGRRCGFRNSSISLETACFEIGSSNKFLTTGLIVGSFLLAAIIVAIHYIFNSYKSQKESQEIIDKFLKDYTELRPTRYSYAEIKRITNQFKDKLGEGSFGTVFKGKISSEFQVAVKILSNSLLGNGEEFITEVGTLAKIHHVNIIRLIGFCADSFRRALVYEYLPNGSSQNFINSLGQRQNFPGWKKLQEIALGIAKGIEYLHHGCEKRILHFDIKPYNVLLDSDFTPKISDFGLAKLCSKNQSIVSMTNARGTFGYMAPEVFSRNFGNVSHKADVYSFGMLLLEMIGGRKITNDAEEDAAHIYYPEWIYNVLEGREDIRIHIEEEEDAMSAKRLGIVGLWCIQWHAVDRPSMQVVVQMLERQEHKLPIPPNPFHSEGPSTSNRASVPARHVMQGLEIIHEGK	617

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju12g0312	617	ProSiteProfiles	Protein kinase domain profile.	302	582	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju12g0312	617	FunFam	PR5-like receptor kinase	378	585	-	-
	Alju12g0312	617	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	424	436	IPR008271	GO:0004672\|GO:0006468
	Alju12g0312	617	FunFam	serine/threonine-protein kinase PBS1-like	268	377	-	-
	Alju12g0312	617	ProSitePatterns	Protein kinases ATP-binding region signature.	308	330	IPR017441	GO:0005524
	Alju12g0312	617	Gene3D	Phosphorylase Kinase; domain 1	277	377	-	-
	Alju12g0312	617	Gene3D	Transferase(Phosphotransferase) domain 1	378	582	-	-
	Alju12g0312	617	Pfam	Wall-associated receptor kinase galacturonan-binding	31	98	IPR025287	GO:0030247
	Alju12g0312	617	PANTHER	RUST RESISTANCE KINASE LR10-RELATED	275	594	IPR045874	GO:0004672
	Alju12g0312	617	Pfam	Protein kinase domain	304	572	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju12g0312	617	SUPERFAMILY	Protein kinase-like (PK-like)	283	578	IPR011009	-
	Alju12g0312	617	SMART	serkin_6	302	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju12g0312	Alju-ChrAlju12	3867822	3869923	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju12g0312	34	596	Receptor kinase-like Gene Family	AT1G66910	36.305	2.59e-109	341

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRK10L-2	Alju12g0312		Pkinase	1.5e-47	CL0016