Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0310 ATGTCTTTGCATGACCAACACTGTCCATACCATAGCCAAGTTCCATTTTCATGGCGTGCATCAATGGTGGAGGAATATGGAACTGAGTTGCTAAAGTATGGAACTGAATTGCTAAAGTTGTAATTGCCCTTATGGCTTACTGATTACAAATCCCAAACCATTCAGCTATATGATCCTTATGGCTTCCTTTCTAGTCATGTGCGTAATCTTACTCTACGTCCTTCCCCTTTCAAGTTCATGGAACAGAATCTTAATGACTTGACAATTTTCAATTGCTCGTCACCAAGAGATGGAGATATTATTTCAATTTTCCTCAGCAGATCTGCTTACCAAGTTTATGCCGTTCTATCTTACCCAGATATTGGACTACTTCCCCTGTTATTTTGCGGCAAAATTTTTAACACTTCATCTGTCCCACCTGAGATTTTTTATGTTCAGAACACTCTTAATTTGATGTGGTCTAATCCAATGTGCAAACTTTTCGACTCAAATGGAGCAAGATGTGGATTCAAAAATAGTACTACCAGCTATGATACTACATGTTTCAGAGATCCTCATAGTGGTTCATCAAACAAATATATAATTACAGTTAGAGGAAACATTTCATCTGAGTTTCAAGTTGCATTGAAGATCCTCACTAATTCTGAAGGAAATGGTGAAGAGTTCATCATTGAAGTTGGAACAATGGGCAAAATCCATCATTTCAACATCATTCACCTAATCGGCCTCTGTGCTAATGGCTTTCGAAGGGCGCTTGTTTATGAATATTTTCCAAATGGAAGAGAAGACATAAGAATTCATATTGAGGAAGAAGGGGATGCTAAAATCGCAAGAAGATTGGGAAGAGTGGGACTATGGTGCATCCAGTGGCATGCTGTGGATCGGCCATCAATGCAAGTGGTAGTTCAAATGTTGGAAGGAGAAGGAAACAAGTTACCAATACCTCCAAATCCTTTTAATTTTGATGGCCCTTCAACAAGAGAAAGGGCCAATGTACGTGCAAGAAATATAATGTAA 1017 0.3864 MSLHDQHCPYHSQVPFSWRASMVEEYGTELLKYGTELLKLXLPLWLTDYKSQTIQLYDPYGFLSSHVRNLTLRPSPFKFMEQNLNDLTIFNCSSPRDGDIISIFLSRSAYQVYAVLSYPDIGLLPLLFCGKIFNTSSVPPEIFYVQNTLNLMWSNPMCKLFDSNGARCGFKNSTTSYDTTCFRDPHSGSSNKYIITVRGNISSEFQVALKILTNSEGNGEEFIIEVGTMGKIHHFNIIHLIGLCANGFRRALVYEYFPNGREDIRIHIEEEGDAKIARRLGRVGLWCIQWHAVDRPSMQVVVQMLEGEGNKLPIPPNPFNFDGPSTRERANVRARNIM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0310 338 Pfam Protein tyrosine and serine/threonine kinase 202 261 IPR001245 GO:0004672|GO:0006468
Alju12g0310 338 SUPERFAMILY Protein kinase-like (PK-like) 202 260 IPR011009 -
Alju12g0310 338 Gene3D Transferase(Phosphotransferase) domain 1 192 273 - -
Alju12g0310 338 PANTHER RUST RESISTANCE KINASE LR10-RELATED 196 263 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0310 Alju-ChrAlju12 3832154 3834431 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0310 267 318 Receptor kinase-like Gene Family AT1G66980 45.455 4.21e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju12g0310 PK_Tyr_Ser-Thr 1.6e-07 CL0016