Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0307 ATGTTCATTTCTTTTGCAGGTTCATCAAACAAATATATAATTACAGGTATAGCCAAAGGAATTGAGTACCTTCATCAACAAGGGTGCGAGCAACGCATACTTCATTTTGACATCAAGCCTCAAAATGTTTTATTAGATGATGACTTCACTTCAAAGATAAGTGATTTTGGGTTGGCTAAATTCTGTTTGAAGAATCAAAATGTTTATAGTTTTGGAATGTTGCTACTAGAAGTAATTGGGGGAAAAAAGATGACCAATGACACAAAAGAAAATACAAGCGAAATATACTACCCAGAATGGATCTATAACATATTTGAAGGAAGAGAAGACATAAGAATTCATATTGAGGAAGAAGGGGATGCTAAAATTGCAAGAAAATTAGGAATGATAGGACTGTGGTGCATCCAATGGCATGCAGTGAATCGACCATCAATGCAAGTGGTGGTTCAAATGTTGGAAGGAGAAGGAGACAAGTTGCCAATACCTCCAAATCCTTTTAATTCTGATGGCCCTTCAACAAGAGAAAGAGTCAATGTACGTGCAAGAAATCTGATGCAAGGTTTAGAAATAATCCAAGAAATAGAGTGA 588 0.3588 MFISFAGSSNKYIITGIAKGIEYLHQQGCEQRILHFDIKPQNVLLDDDFTSKISDFGLAKFCLKNQNVYSFGMLLLEVIGGKKMTNDTKENTSEIYYPEWIYNIFEGREDIRIHIEEEGDAKIARKLGMIGLWCIQWHAVNRPSMQVVVQMLEGEGDKLPIPPNPFNSDGPSTRERVNVRARNLMQGLEIIQEIE 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0307 195 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0307 195 Gene3D Transferase(Phosphotransferase) domain 1 8 65 - -
Alju12g0307 195 ProSitePatterns Serine/Threonine protein kinases active-site signature. 33 45 IPR008271 GO:0004672|GO:0006468
Alju12g0307 195 Gene3D Transferase(Phosphotransferase) domain 1 66 158 - -
Alju12g0307 195 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 65 IPR045874 GO:0004672
Alju12g0307 195 SUPERFAMILY Protein kinase-like (PK-like) 11 168 IPR011009 -
Alju12g0307 195 Pfam Protein kinase domain 9 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0307 Alju-ChrAlju12 3824834 3826087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0307 13 165 Receptor kinase-like Gene Family AT1G66980 42.105 3.36e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju12g0307 Pkinase 2.2e-13 CL0016