Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0306 ATGATGAGGGACATGGGTTCCTCTTCTCGAATATTACTGGTGGCTCTGTGTCTGATACTGTCATTCTGCAGAACTTGTAAGGCACTTGATGGACACCAGAACTGTTCTAGTTTGTGTGGAGATCATAATGTTAGAAGCCCATTTCGGCTAAATGGCTCTGCAGAGAAGTGTGGTGATCACAGGTACAACCTATCATGCGAGCAAAACCAATTGGTAACGTACTGGCAATCTATGAGATACAGGGTTTTGTCCATTGATTATGAAAACTACACAATCAGAGTAAGGGATTCTAATATTGTGGAGTTGGATTCATCGTCCCTTCCTGGGTATTCTTTAACAGACTACAACTTTAGCAAATGGGATCCATATACTACTTCCACCATCAATGCACGCAATGAAAATGGAGTGTGGCAATGGAATTGGTTTAACACAAATATGATATATGTAAGGTGTGAACACCCTGTGGATTCCCCTAAGTTTGTGGACACAGCCACTTGCTTCAAAACATCAAATGGCTCTGTGACTTCTTCTTCTTCTTCACCGAATTCGTATGTGTATGTTGGCAGCGGATATGTAGGGGATGTGGGGTTAGAAGATGATTGTCGTATAGAAATGATGTATATGACTTCTTGGCCCGCTCGGAAGAACAACCAGAACCAGTCTGCTTGGTCATGCACAGATATCCACAATATGCTTCTTCATGGTTTTGAGCTCTCTTGGCTCAACAGTTTCTGCCCGGACTCTGGAGATGGTCATGAAATAATTCTCGGTGTCGGTGGTCAGAAACCACGCTGTCAAATAGAAGCAGGTAGCATTTTTGAATTGATCCTTTTGAAAATCAAGGGTAAGGCATCTCATGCTGCTTGGGGATACTTAAGCACTATATTAGGACAACTTCGAAGTGGTCGTCATGTGGCTGTCAAGATGTTGGATAAGGCTGAAGCCAATGGTCAGGATTTTATCAACGAAGTTGCTACACTTGGTAGAATCCACCATGTTAATGTGGTACAGCTCATCGGCTTCTGTGTGGAAGGATCAAAGCGTGCTCTTATTTATGAATTCATGCAAAATGGATCTCTTGACAAATACATTCTCTCCAAACACGACCAAGGGAAATTCTTGGATCTTCATCAGTTGTATGCCATTTCTCTTGGAGTGGCTCATGGTATTGAATATCTTCACAAAGGTTGCAATATGCAAATTTTGCATTTTGATATAAAGCCACATAACATCCTTCTTGATGATAACTTCATTCCCAAGGTTTCTGATTTTGGGCTTGCCAAGCTCTATCCTACTAATGATAGTATCGTGGCTCTCACAGCAGTAAGAGGAACTATAGGATACATGGCCCCTGAACTCTTTTATAGAAATGTGGGTGGAATTTCTAACAAAGCCGACGTTTATAGTTTTGGGAAGTTATTAATGGATATTGCTGGTAGAAGAAAGAATTTAAATGTGACAGCTGAGCAGTCAAGTCAATTTTACTTTCCCTTCTGGGTTTATGATCAATTAAATGAAGGAAATGAGATTAACATAGAAAATGCAACCGAAGAAGAAATGGATTTGGCAAGGAAAATGATGACTGTGGGACTGTGGTGCATCCAAACTAAGCCTGATGATCGTCCTTCAATGAACAAAGTTGTAGAAATGCTTGAGGGAGAGGAGAATGACTTAGAGATGCCTCAAAAGCCTTATCTATATCCACAAGATTTACCGAACGTTGATGTTAGTAACCATTCAAGTTCAATAATGTCATCCTCTGATCTATCAGTAAGTAATTGTACAGAAACAACTTTATTTTCACCTCCAGAAGATGGGAGATCAGCATAG 1830 0.406 MMRDMGSSSRILLVALCLILSFCRTCKALDGHQNCSSLCGDHNVRSPFRLNGSAEKCGDHRYNLSCEQNQLVTYWQSMRYRVLSIDYENYTIRVRDSNIVELDSSSLPGYSLTDYNFSKWDPYTTSTINARNENGVWQWNWFNTNMIYVRCEHPVDSPKFVDTATCFKTSNGSVTSSSSSPNSYVYVGSGYVGDVGLEDDCRIEMMYMTSWPARKNNQNQSAWSCTDIHNMLLHGFELSWLNSFCPDSGDGHEIILGVGGQKPRCQIEAGSIFELILLKIKGKASHAAWGYLSTILGQLRSGRHVAVKMLDKAEANGQDFINEVATLGRIHHVNVVQLIGFCVEGSKRALIYEFMQNGSLDKYILSKHDQGKFLDLHQLYAISLGVAHGIEYLHKGCNMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPTNDSIVALTAVRGTIGYMAPELFYRNVGGISNKADVYSFGKLLMDIAGRRKNLNVTAEQSSQFYFPFWVYDQLNEGNEINIENATEEEMDLARKMMTVGLWCIQTKPDDRPSMNKVVEMLEGEENDLEMPQKPYLYPQDLPNVDVSNHSSSIMSSSDLSVSNCTETTLFSPPEDGRSA 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0306 609 ProSiteProfiles Protein kinase domain profile. 278 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0306 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 401 413 IPR008271 GO:0004672|GO:0006468
Alju12g0306 609 Gene3D Transferase(Phosphotransferase) domain 1 356 563 - -
Alju12g0306 609 Pfam Protein tyrosine and serine/threonine kinase 300 551 IPR001245 GO:0004672|GO:0006468
Alju12g0306 609 SMART serkin_6 289 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0306 609 Pfam Wall-associated receptor kinase galacturonan-binding 35 96 IPR025287 GO:0030247
Alju12g0306 609 SUPERFAMILY Protein kinase-like (PK-like) 295 553 IPR011009 -
Alju12g0306 609 Gene3D Phosphorylase Kinase; domain 1 290 355 - -
Alju12g0306 609 MobiDBLite consensus disorder prediction 584 609 - -
Alju12g0306 609 PANTHER RUST RESISTANCE KINASE LR10-RELATED 289 577 IPR045874 GO:0004672
Alju12g0306 609 FunFam PR5-like receptor kinase 355 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0306 Alju-ChrAlju12 3820498 3824164 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0306 290 581 Receptor kinase-like Gene Family AT1G66910 52.703 2.80e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju12g0306 PK_Tyr_Ser-Thr 2.6e-41 CL0016