Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0297 ATGTTCATAATCACATATAAATGCAATAATTTTATGTGGGTATTCTCCATCTCCTCAATCGCCATGTCTGTGTCCCCAAACCACCACCTAGTAACTCTTGACTTGTTCTGCAATGAAGCAGCCAGCGACGTGGTTTCATCGGATTCCAGTGTTACTAACTGCGAATCATTGGCGGCTTCTTCGAGTGTCTCGTGCGATTCCGATGACGAAAACTGTGTCTCTACTTTACTGGACTCGGAACTTGATCAAATACAGGAAAGACAGCAGTCACTTTCTCTGCTCCACCAAAAAACATGGCTTAGAACTCCTCGAAAAGAAGCCATAAAATGGATGCTAAAGGTGCAAGGTTATTACTGTTTTACACCAGAGACGGCATGTCTATCCGTGAACTATCTTGACCGTTTTCTTTTGTCACACTCACTGCCGCAAGATGAGGCATGGCCTTTGCAGCTAGTAGCAGTTGCTTGTCTGTCCCTGGCAGCAAAAATGGAAGAAACAAGTGTGCCACTTTTAGTGGACTTGCAAATGATAGAGCCTAGGTTCTTGTTTGAGCCTAAAACAGTTCAAAGAATGGAGCTTTTGGTTATGGCGGCTCTCAGATGGCGATTGCGTGCTGTTACTCCTTTTGATTTTGCTCATCTTTTCATTGCTATGACTAATAAGAAGCTGTCATCATGCTCTGCCTCCTGTCACATTATTTCTCGTGTCTCAGATATTATAATCAGAACATGTTTAGTAATCGATTTCTTAGAGTATCCTCCATCTGTAATAGCAGTTGCTGCTCTGCTTTGGACAACAAATCGATATGTTGATGAACAGAGTATAAGCTTATTCCACGAAAATATAAGCAGAGAGATGGTGCAGAAATGTTACAACCTCATGAAGCAGAGGATTATTTTCAGAACAGAACATTCTGCAACAACGAATTCAGATTCTTTGCCCCCAAGTCCTACTTGTGTGCTTGATCACAAGCCTTGA 978 0.4213 MFIITYKCNNFMWVFSISSIAMSVSPNHHLVTLDLFCNEAASDVVSSDSSVTNCESLAASSSVSCDSDDENCVSTLLDSELDQIQERQQSLSLLHQKTWLRTPRKEAIKWMLKVQGYYCFTPETACLSVNYLDRFLLSHSLPQDEAWPLQLVAVACLSLAAKMEETSVPLLVDLQMIEPRFLFEPKTVQRMELLVMAALRWRLRAVTPFDFAHLFIAMTNKKLSSCSASCHIISRVSDIIIRTCLVIDFLEYPPSVIAVAALLWTTNRYVDEQSISLFHENISREMVQKCYNLMKQRIIFRTEHSATTNSDSLPPSPTCVLDHKP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0297 325 SMART cyclin_7 109 197 IPR013763 -
Alju12g0297 325 SUPERFAMILY Cyclin-like 188 303 IPR036915 -
Alju12g0297 325 PANTHER CYCLINS 61 296 IPR039361 -
Alju12g0297 325 Gene3D - 93 204 - -
Alju12g0297 325 Gene3D - 205 291 - -
Alju12g0297 325 Pfam Cyclin, N-terminal domain 78 203 IPR006671 -
Alju12g0297 325 SMART Cyclin_C_2 206 316 IPR004367 -
Alju12g0297 325 CDD CYCLIN_AtCycD-like_rpt1 104 201 - -
Alju12g0297 325 Pfam Cyclin, C-terminal domain 206 302 IPR004367 -
Alju12g0297 325 FunFam D6-type cyclin 87 204 - -
Alju12g0297 325 ProSitePatterns Cyclins signature. 104 135 IPR006671 -
Alju12g0297 325 SUPERFAMILY Cyclin-like 69 203 IPR036915 -
Alju12g0297 325 CDD CYCLIN_AtCycD-like_rpt2 206 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0297 Alju-ChrAlju12 3736851 3738259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0297 33 299 Core Cell Cycle Gene Families AT1G70210 40.876 1.44e-58 190