Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0287 ATGGATACCTTGTTTCGTCTTGTCAGTTTTCAATCTCAACCATCATCAACTGATCCTCACTCCTTCAACAACTCCTCTACCAGCTCTAGATCCTCCACACACAACAACAACAACAACTTCCACCACCACCACCACTACCACCACCACCACCAGCAAGACGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTGTCCTCGCCGTCTTCTTCTAGACACTACTATCCTTATCATCATCATCCTCACCCGTCCTCCTCCGCCGCAGCTGCCACCCCTACCGCCACCACTGCTGCTACTACTTTCACCACCACCACTCCCACCACCTCTGATTTCTCCTTCTCCCTCTCCCCCACTACACCTGACCTGCACAACTTCGAATTCTCCGGCCGATGGGCTCATGACCTCCTCCTCGAAGCCGCCCGTGCGGTCGCCGACAAGAACACCTCCCGTGTCCAGCAGTTAATCTGGATGCTCAACGAGCTCGCCAGTCCTTATGGTGACACCGATCAGAAGCTCGCCTCTTACTTCCTTCAGGCTCTTTTCAGTCGTGTCACCGACTCCGGCAGCCGAACCTACCGTACGTTGGCCTCCGCGTCGGACAAAACATGCTCTTTTGAGTCTACAAGGAAGATGGTGTTGAAGTTCCAAGAAGTCAGCCCTTGGACTACTTTTGGTCACGTCGCTTCCAATGGTGCCATATTAGAGGCCTTAGAAGGTGAGCCCAAGTTGCACATAGTTGATATTAGTGACACATATTGCACCCAGTGGCCTACTCTTCTAGAAGCCTTGGCCACTCGCAGCGACGACACCCCACACCTCCGGCTAACCACGGTTGTTAGCCGCCGAGCCGGGGGCTCCATCGCAGCGGTTCAGAGAGTCATGAAGGAGATAGGGACTAGAATGGAGAAATTCGCTAGGCTCATGGGTGTACCCTTTAAATTCAACGTCATTCATCACGCGGGTGATCTGTCGGACCTTAATTTCTCCGAATTAGACATTAAAGAGGATGAGGCTCTGGCCATTAACTGTGTCAACACGTTACATTCCGTTACGGGGTTTGGTAATAACCGTGACATATTGATATCCTCGTTTCGGAGATTACAACCTAGGATAGTCACTGTGGTGGAAGATGAGGCTGATCTTGATGTTGGATTTCATGGGTTTGAATTTGTACGAGGTTTTCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTCGAGGCGCTCGAAGAGAGCTTCCCTCGAGCAAGCAACGAGCGTTTAATGCTAGAGAGATCGGCGGGAAGAGCCATCGTTGACTTGGTGGCTTGTGATCCGTCGCAGTCGGTAGAACGGCGGGAGACTGCTGTGAGGTGGTCGCAGCGGCTGAATGGTCGTGGGTTCAACGCGGTGCCGTTCAGCGATGAGGTTTCCGACGACGTGAGAGCTCTGTTGAGGAGGTACAAGGAAGGGTGGGCAATAACACATTGCTCCGACGCCGGAATATTCTTGTCGTGGAAGGAACAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1542 0.522 MDTLFRLVSFQSQPSSTDPHSFNNSSTSSRSSTHNNNNNFHHHHHYHHHHQQDDEECFNFFMDEEDLSSPSSSRHYYPYHHHPHPSSSAAAATPTATTAATTFTTTTPTTSDFSFSLSPTTPDLHNFEFSGRWAHDLLLEAARAVADKNTSRVQQLIWMLNELASPYGDTDQKLASYFLQALFSRVTDSGSRTYRTLASASDKTCSFESTRKMVLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISDTYCTQWPTLLEALATRSDDTPHLRLTTVVSRRAGGSIAAVQRVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSDLNFSELDIKEDEALAINCVNTLHSVTGFGNNRDILISSFRRLQPRIVTVVEDEADLDVGFHGFEFVRGFQECLRWFRVYFEALEESFPRASNERLMLERSAGRAIVDLVACDPSQSVERRETAVRWSQRLNGRGFNAVPFSDEVSDDVRALLRRYKEGWAITHCSDAGIFLSWKEQPVVWASAWRP 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0287 513 MobiDBLite consensus disorder prediction 8 36 - -
Alju12g0287 513 MobiDBLite consensus disorder prediction 72 95 - -
Alju12g0287 513 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 502 IPR005202 -
Alju12g0287 513 MobiDBLite consensus disorder prediction 8 48 - -
Alju12g0287 513 Pfam GRAS domain family 136 512 IPR005202 -
Alju12g0287 513 ProSiteProfiles GRAS family profile. 125 512 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0287 Alju-ChrAlju12 3662292 3663833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0287 1 513 GRAS Transcription Factor Family AT4G37650 60.894 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju12g0287 GRAS 1.6e-107 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0287 12 3662292 3663833 Alju12g0287 12 3662292 3663833 ECH