Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0282 ATGGAGGGTGCATCTATCTTTTGTTTGTTCAGTGGTAGCGAGTACAAGGCGCTAATATTGGCCATATGGATCATCAAGAGGCGTTGTTTGGTGGATGGTCGATGTGAAGAGAAGGTGGCTTGGTTTGATGATCTTGTGGATGACTTTTCTTTTAGTTTGGCTATTATCACTGATAGCACGGAAAAAACCCTAGCTCTTCCTCTGTTTCAGAAGAGATCGAATATGAAATACAATCCAAGAGTTTCAAGCTCTCGCCGCAAGAATCGCAAGGCCCACTTTACGGCGCCGTCGAGTGTTCGCCGTGTGATTATGAGCGCGCCGCTCTCGTCGGACCTCCGTTCAAAGTACAACGTTCGATCTATGCCCATTCGCAAGGACGATGAAGTTCAGATTGTTCGAGGCACCTACAAGGGGCGTGACGGTAAGGTTGTTCAAGTTTACCGCCGAAAATGGGTCATCCATATCGAGCGGATTACCCGCGAGAAGGTAAATGGATCGACCGTCAATGTTGGGATCAATCCATCGAAAGTTGTGATCACGAAGCTGAGGTTGGACAAGGATCGTAAGTCATTGCTTGATCGTAAGGCCAAGGGTCGTGCGGCTGCGGACAAGGACAAGGGAACCAAATTCACTGCTGAGGACATTATGCAAAGTGTCGATTAG 663 0.4811 MEGASIFCLFSGSEYKALILAIWIIKRRCLVDGRCEEKVAWFDDLVDDFSFSLAIITDSTEKTLALPLFQKRSNMKYNPRVSSSRRKNRKAHFTAPSSVRRVIMSAPLSSDLRSKYNVRSMPIRKDDEVQIVRGTYKGRDGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0282 220 CDD KOW_RPL26 126 179 IPR041988 GO:0003723
Alju12g0282 220 ProSitePatterns Ribosomal protein L24 signature. 126 143 IPR005825 GO:0003735|GO:0005840|GO:0006412
Alju12g0282 220 Hamap 50S ribosomal protein L24 [rplX]. 74 195 IPR005756 GO:0003735|GO:0006412|GO:0015934
Alju12g0282 220 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 75 215 IPR005756 GO:0003735|GO:0006412|GO:0015934
Alju12g0282 220 SMART kow_9 122 149 IPR005824 -
Alju12g0282 220 NCBIfam 50S ribosomal protein L24 82 196 IPR005756 GO:0003735|GO:0006412|GO:0015934
Alju12g0282 220 Pfam KOW motif 125 156 IPR005824 -
Alju12g0282 220 FunFam 60S ribosomal protein L26 75 218 - -
Alju12g0282 220 SUPERFAMILY Translation proteins SH3-like domain 82 199 IPR008991 -
Alju12g0282 220 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 82 195 IPR005756 GO:0003735|GO:0006412|GO:0015934
Alju12g0282 220 Gene3D - 75 218 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0282 Alju-ChrAlju12 3609217 3613565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0282 75 220 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 90.411 2.69e-95 273