Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0279 ATGGGAGAAGAGTACGGAAGGGCAGTGGTAGTGAGAGAGTTCGATCCCAATAAAGACAGAGAGAAAGTGGAAGCAGTAGAAACAATATGTGAAGTTGGACCCAGCGGGAAGCTTTCTCTCTTCACCGACCTCCTCGGTGACCCAATTTGCAGGGTCCGCCACTCCCCTGCTTTCCGCATGCTGGTGGCTGAGATAGGCGATAAGATTGTGGGAATGATAAGAGGTTGCATCAAAACCGTCACATGCGGAAAGAAGTTCACCAGAAATTGGAACAAATCTCAGTTCACTGAAACCCTCCCTGTATACACAAAACTCGCCTACATCTTAGGTCTTCGCGTTTCTCCTTCTTACCGGAGAATGGGAATAGGGTTGAAGCTTGTGAATACAATGGAGGAATGGTTCAGAGGCAATGGAGCTGAATACTCGTACATGGCGACGGAAAAGGACAATTTGGCGTCGGTTATACTCTTCACCGACAAATGCGGATACTCCAAGTTCCGTACACCGTCGATCCTCGTCAATCCGGTTTTCGCTCATCGGATTAGTATTTCTCGGAAGATCAGTGTGATCCAACTCGGTTCCTCCGACGCCGAGAAGCTCTATCGCCGCCGATTCGCCACCACCGAGTTCTTCCCGCGCGACATTCGCTCCATCCTCAACAATAAACTCACCCTTGGCACTTTCCTCGCCGTCCCGCGCGGGTCATTTAGTCCAGACACGTGGCCCGGGTCGGACTTATTCCTCTCGGACCCACCCGAGTCATGGGCGGTTATCAGCGTCTGGAACTGTAAGGAAGTGTTCACGCTCGAGGTCCGAGGCGCGTCGCGGGTGAAGCGTACCCTGGCCAAAACGACTCGGATTGTGGACCGGGCGCTGCCGTTTCTTCAGCTGCCGTCAATCCCGAATTTTTTCCGGCCGTTCGGGTTCCACTTTATGTACGGATTAGGAGGGCAAGGACCAGAGGTGGCGAAGATGGTGAAGGCGTTGTGCGGTCACGCGCACAACCTGGCGAAGGAGCATGGGTGTAGGGCGGTTGTGACGGAGGTTTCGAGCTGTGAACCGTTGAAGTTAGGAATACCACACTGGAAGATGCTATCATGCGCCGAGGATTTATGGTGCATCAAGAGGCTCGGGGAAGACTATAGTGACGGCTCTGTCGGTGACTGGACAAAATCTCCCCCTGGATTGTCCATTTTCGTTGACCCCAGAGAATTCTAA 1218 0.5287 MGEEYGRAVVVREFDPNKDREKVEAVETICEVGPSGKLSLFTDLLGDPICRVRHSPAFRMLVAEIGDKIVGMIRGCIKTVTCGKKFTRNWNKSQFTETLPVYTKLAYILGLRVSPSYRRMGIGLKLVNTMEEWFRGNGAEYSYMATEKDNLASVILFTDKCGYSKFRTPSILVNPVFAHRISISRKISVIQLGSSDAEKLYRRRFATTEFFPRDIRSILNNKLTLGTFLAVPRGSFSPDTWPGSDLFLSDPPESWAVISVWNCKEVFTLEVRGASRVKRTLAKTTRIVDRALPFLQLPSIPNFFRPFGFHFMYGLGGQGPEVAKMVKALCGHAHNLAKEHGCRAVVTEVSSCEPLKLGIPHWKMLSCAEDLWCIKRLGEDYSDGSVGDWTKSPPGLSIFVDPREF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0279 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 184 IPR000182 GO:0016747
Alju12g0279 405 Pfam Acetyltransferase (GNAT) family 56 163 IPR000182 GO:0016747
Alju12g0279 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 51 165 IPR016181 -
Alju12g0279 405 CDD NAT_SF 60 141 - -
Alju12g0279 405 Gene3D - 43 169 - -
Alju12g0279 405 FunFam Probable N-acetyltransferase HLS1-like 18 170 - -
Alju12g0279 405 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0279 Alju-ChrAlju12 3518031 3519519 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Alju12g0279 Acetyltransf_1 8.3e-18 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2022 09 43961014 43962689 Alju12g0279 12 3518031 3519519 CCT
Alju12g0279 12 3518031 3519519 Alju12g0279 12 3518031 3519519 ECH