Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0276 ATGAAGGCCATGAATGATGCCGATGAGTTCAACTATGGCAGGGGGAACATCAACTCAAGTGAAGCACAAAGTGTGGTTAACATAAACAACAAATACAAATATTGCCAATATCTAATGGATGCTCAGAATTTAATTCCAGTACCGCCTCACCCTTTTCCTGAGTCAGCATCGATGAGTTTCACCCGCGAGAAAAAGTTGATAAACAATTTATTAACTCCAAGAATGTGCAGCTATGTGTCCACAACAACAAGAGATTTGTGGGATCGTCTTTTTGATGAAGCTTATAAAGCAGATGTTTGCATTAATACTCGTAATGGTGGTATTCTCTTTGCTCATTCTAACGTTCTTGGGATGGCTTCTCCAGTATTGAGAGGCATGCTTAAGCAAGCAAGTTGTGGTCGTGGTCGGCGATCAATCTCCATTCCTGGGGTTCCACACGATGCCGTCCGAGTTTTTATTCGATTCCTCTATTCTTCATGCTATGAGGAAGAAGATATGAAGGAATTGGCGTTGCCATTGTTGGCGCTGTCACATGCATTTGTAGTCCCTCACTTGAAGCGTGAATGTGAAGAGAGGCTAGAGACGAGTTTACTCACAATAGACAACGTAGTTGACGTATTTCAGCTTGCATTGTTATGTGATGCTCCAAGGCTGACCGTAATTTGTTACCGAATGATCTCAAACAATCTCAAACCTGTTTCAAAGTCTCAAGGTTGGAAGGCAATGAAGGAGAGTCACCCATTTCTGGAAAACCAACTTCTTGAACACATAACTGTGGAACAAAATATAAAGAAGATGAGGAAGAGAAAGATTGTAGAAAAGAAGATGTATATGGAACTGTACGAGGCAATGGAGGCACTTGTTCATATATGTAGAGTTGGGTGTAGAACAATTGGACCCCACGATAAAGATTTAAAAGCAAATGAATCTCCTTGTGGTTATGCAGCTTGCAAGAGCATAGAATTGCTTATTCGTCATTTTGTTGCCTGTAAATTGAGGGTCCCACGTGGTTGCATTCATTGTAAGAGAATGTGGCAATTATTTCAGTTACATTCTCGACTATGTGCTGATCCACACATCTGTAAAGTCCCTTTATGCAGGAGCTTCAAGCAAAAAATATCGTATCAAAGGAAGAAAGATGAGATGAAGTGGAAAATATTGGTTCAGAAGATTTTGAGAGCAAAGGGTATTGCTGTGGCGCCAATTTTTCAACAGCAGTAG 1221 0.407 MKAMNDADEFNYGRGNINSSEAQSVVNINNKYKYCQYLMDAQNLIPVPPHPFPESASMSFTREKKLINNLLTPRMCSYVSTTTRDLWDRLFDEAYKADVCINTRNGGILFAHSNVLGMASPVLRGMLKQASCGRGRRSISIPGVPHDAVRVFIRFLYSSCYEEEDMKELALPLLALSHAFVVPHLKRECEERLETSLLTIDNVVDVFQLALLCDAPRLTVICYRMISNNLKPVSKSQGWKAMKESHPFLENQLLEHITVEQNIKKMRKRKIVEKKMYMELYEAMEALVHICRVGCRTIGPHDKDLKANESPCGYAACKSIELLIRHFVACKLRVPRGCIHCKRMWQLFQLHSRLCADPHICKVPLCRSFKQKISYQRKKDEMKWKILVQKILRAKGIAVAPIFQQQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0276 406 Gene3D - 199 271 - -
Alju12g0276 406 Pfam TAZ zinc finger 281 366 IPR000197 -
Alju12g0276 406 ProSiteProfiles BTB domain profile. 97 165 IPR000210 GO:0005515
Alju12g0276 406 Gene3D Potassium Channel Kv1.1; Chain A 74 198 IPR011333 -
Alju12g0276 406 FunFam BTB/POZ and TAZ domain-containing protein 2 199 269 - -
Alju12g0276 406 SMART TAZ_2 274 367 IPR000197 -
Alju12g0276 406 SUPERFAMILY POZ domain 78 226 IPR011333 -
Alju12g0276 406 Pfam BTB/POZ domain 91 196 IPR000210 GO:0005515
Alju12g0276 406 Gene3D TAZ domain 272 394 IPR035898 -
Alju12g0276 406 FunFam BTB/POZ and TAZ domain-containing protein 2 271 396 - -
Alju12g0276 406 SUPERFAMILY TAZ domain 273 374 IPR035898 -
Alju12g0276 406 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 65 400 IPR044513 -
Alju12g0276 406 SMART BTB_4 97 197 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0276 Alju-ChrAlju12 3478977 3481694 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Alju12g0276 BTB 1.7e-11 CL0033