Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0274 ATGGAGACTTATTTACAAGAAAACTTTGAAGTCAAGTCCAAGAACTCATCTGACGAGGTTCTTCAGAATTGGAGAAAACTATGTGGGGTTGTTAAGAACCCAAAAAGAAGGTTTCGCTTCACTGCTAATCTATCCAAGCGAGGCGAAGCCGCTGCTATGCGTCGCACAAATCAGGAGAAATTGAGGGTTGCTGTTTTGGTTTCCAAAGCAGCATTTCAGTTCATCCAAGGTGCGCAACCAAGTGATTACGCAGTACCTGAAGAAGTTAAAGAAGCAGGCTTTCAGATCTGTGCGGATGAATTGGAGTCCATTGTGGAAGGACACGACATAAAGAAGCTAAAATATCATGGTGGGGTTGATGGAATTTCAGAAAAGCTTTCAACTTCAACCACTGATGGCATCAGCAATGACTCTGACCAACTTATCAAGAGACAAGAAATCTACGGAATCAACAAATTCACCGAAAGCGAATCCCGTAGTTTCTGGGTTTTTGTCTTCGAAGCCCTTCAAGACATGACACTAATGATCCTAGGCGTGTGTGCAATTGTGTCTCTCATAATTGGAATAGCGACAGAAGGATGGCCCAGAGGAGCTCACGATGGCCTAGGAATCGTCGTAAGTATCCTCTTGGTCGTGTTTGTGACAGCAACAAGTGATTATCGCCAATCATTACAGTTCAAAGATTTAGACAAGGAGAAGAAAAAGATCTACATGCAGGTCACAAGAAATGGGTATAGAGAAAAAATGTCAATATATGATTTAGTTCCGGGCGACATTGTTCATCTAGCTATCGGAGATCAAGTCCCCGCCGATGGACTCTTTGTTTCAGGATTCTCTGTTTTGATCGATGAGTCAAGTTTAACCGGAGAGAGCGAACCGGTGATGGTGAATTCTCAGAACCCATTTCTTCTTTCAGGAACAAAAGTTCAAGATGGATCGTGTAAAATGCTGGTCACAACCGTAGGGATGAGAACTCAATGGGGAAAATTAATGGCTACGTTAAGTGAAGGTGGAGATGATGAAACGCCGTTACAGGTGAAACTTAACGGTGTTGCCACTATCATAGGGAAGATAGGCTTGTTCTTCGCTGTTATTACTTTTGTCGTTTTGATGAAGGGACTTATGGCACGTAAGCGACAAGAAGGAAGATTTTGGAGTGTGTCTGGAGACGACGCCATGGAGATGTTGGAATTCTTTGCCGTTGCCGTTACCATCGTTGTCGTTGCTGTTCCAGAAGGTTTGCCACTAGCTGTGACACTGAGCCTTGCGTTTGCTATGAAAAAAATGATGAACGACAAAGCACTTGTACGACACTTGGCAGCCTGTGAAACGATGGGTTCAGCGACAAGTATTTGCAGTGACAAGACAGGAACCTTAACGACCAATCGTATGACTGTTGTCAAAACCTGCATATGTATGAACATCAAGGAAGTAACCAATGAGGAACAACAAACAGAGAAGTTATTACCGGATTCTGCTTTGAAACTGTTATTAGAGTCTATATTTAATAACACTGGAGGAGAAGTTGTGGCTAAGAGAAGAGGCAAAAGGAAACGTGAGATATTGGGTACACCTACAGAAGCTGCAATATTGGAATATGGACTTTCACTTGGTGGGGATTTTCAGAAAGAGAGAAAAGCATGTAAGATTGTGAAAGTTGAGCCATTTAACTCAGAAAAAAAGAGAATGGGTGTGGTTTTGGAGCTTCCTGAAGGAAATCTTAGAGCTCATTGTAAAGGTGCTTCTGAGATTGTCCTAGCTGCTTGTGACACAGTGATTGATTCAAACGGTGAGGTTGTGCCAATTGATGCAGAGAAGAGTAATTATCTTAAAGAAACAATCCATTCTTTTGCTTGTGAGGCACTTAGAACTCTTTGCCTTGCTTATATGGAATTGGAAAATGGGTTTTCTGCTGAAGATCCTATTCCTAGTTCTGGATATACTTGTGTTGGGATTGTGGGTATCAAAGATCCTGTTCGTCCTGGTGTTAAGGAATCTGTTGCAATTTGTCGTAAAGCGGGTATAACAGTTAGAATGGTCACAGGTGATAATATTAATACTGCAAAGGCTATAGCAAGAGAATGTGGGATTTTAACAGATGATGGAATAGCCATAGAAGGTCCAGACTTTAGAGAGAAAACTCAGGAGGAAATGTTTAAACTGATTCCTAAAATTCAGGTTATGGCTAGATCCTCGCCATTAGATAAGCATACTTTGGTGAAACAATTGCGTACTACGTTTGGAGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGACGCCCCTGCCCTTCATGAGGCAGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGCGCTGATGTCATAATTATGGATGATAATTTCTCTACTATAGTGACAGTGGCAAAATGGGGACGTTCAGTTTACATAAACATTCAAAAATTTGTACAGTTTCAGCTAACAGTTAATGTGGTTGCCTTACTTGTGAACTTCAGTTCAGCATGCACAACAGGAAGTGCACCTCTCACAGCAGTTCAATTATTGTGGGTGAACATGATAATGGACACCCTTGGAGCACTTGCGCTAGCAACTGAACCTCCGAACGATGAACTAATGAAGCGTTCACCGGTCGGAAGGCAAGGAAGTTTCATCAGCAATGTCATGTGGAGGAACATTTTAGGCCAATCTCTGTATCAAGTCCTGCTGATATGGATTCTTCAGGCCAAAGGGAAATGGATCTTTGGAATGAAGGGTCCAGATTCTGATATCTTGTTAAACACACTCATCTTCAACTCATTTGTCTTCTGTCAGGTTTTCAACGAGATAAGCTCACGAGAGATGGAGGAAATAGATGTATTCAAAGGTATATTGGATAATCATGTCTTTGTGGGGGTCATAAGTGTCACTGTCTTGTTTCAAATCATAATAGTTGAGTACTTAGGAGCCTACGCTAATACCACACCCCTTGCTCCTATTTACTGGTTGTTTAGCATTTTTGTTGGATATTTAGGCATGCCCATTGCAGCTCGCTTAAAGAAGATCCCAGTTTGA 3048 0.4183 METYLQENFEVKSKNSSDEVLQNWRKLCGVVKNPKRRFRFTANLSKRGEAAAMRRTNQEKLRVAVLVSKAAFQFIQGAQPSDYAVPEEVKEAGFQICADELESIVEGHDIKKLKYHGGVDGISEKLSTSTTDGISNDSDQLIKRQEIYGINKFTESESRSFWVFVFEALQDMTLMILGVCAIVSLIIGIATEGWPRGAHDGLGIVVSILLVVFVTATSDYRQSLQFKDLDKEKKKIYMQVTRNGYREKMSIYDLVPGDIVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVNSQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFVVLMKGLMARKRQEGRFWSVSGDDAMEMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNRMTVVKTCICMNIKEVTNEEQQTEKLLPDSALKLLLESIFNNTGGEVVAKRRGKRKREILGTPTEAAILEYGLSLGGDFQKERKACKIVKVEPFNSEKKRMGVVLELPEGNLRAHCKGASEIVLAACDTVIDSNGEVVPIDAEKSNYLKETIHSFACEALRTLCLAYMELENGFSAEDPIPSSGYTCVGIVGIKDPVRPGVKESVAICRKAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKTQEEMFKLIPKIQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIMDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACTTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRQGSFISNVMWRNILGQSLYQVLLIWILQAKGKWIFGMKGPDSDILLNTLIFNSFVFCQVFNEISSREMEEIDVFKGILDNHVFVGVISVTVLFQIIIVEYLGAYANTTPLAPIYWLFSIFVGYLGMPIAARLKKIPV 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0274 1015 SMART Cation_ATPase_N_a_2 113 189 IPR004014 -
Alju12g0274 1015 SFLD p-type atpase 434 806 IPR044492 -
Alju12g0274 1015 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 458 663 IPR023299 GO:0000166
Alju12g0274 1015 Gene3D - 138 335 - -
Alju12g0274 1015 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Alju12g0274 1015 Pfam Cation transport ATPase (P-type) 514 592 - -
Alju12g0274 1015 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Alju12g0274 1015 PANTHER CATION TRANSPORTING ATPASE 70 1014 - -
Alju12g0274 1015 NCBIfam calcium-translocating P-type ATPase, PMCA-type 107 1015 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Alju12g0274 1015 Gene3D - 16 76 - -
Alju12g0274 1015 Pfam Cation transporter/ATPase, N-terminus 115 184 IPR004014 -
Alju12g0274 1015 Gene3D - 462 658 IPR023299 GO:0000166
Alju12g0274 1015 SFLD Haloacid Dehalogenase 434 806 - -
Alju12g0274 1015 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1014 IPR023298 -
Alju12g0274 1015 NCBIfam HAD-IC family P-type ATPase 546 699 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju12g0274 1015 NCBIfam HAD-IC family P-type ATPase 392 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju12g0274 1015 NCBIfam HAD-IC family P-type ATPase 204 374 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju12g0274 1015 NCBIfam HAD-IC family P-type ATPase 724 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju12g0274 1015 SUPERFAMILY Calcium ATPase, transduction domain A 237 332 IPR008250 -
Alju12g0274 1015 Pfam E1-E2 ATPase 236 430 - -
Alju12g0274 1015 FunFam Calcium-transporting ATPase 16 76 - -
Alju12g0274 1015 PRINTS Sodium/potassium-transporting ATPase signature 445 466 - -
Alju12g0274 1015 PRINTS Sodium/potassium-transporting ATPase signature 202 222 - -
Alju12g0274 1015 PRINTS Sodium/potassium-transporting ATPase signature 576 594 - -
Alju12g0274 1015 FunFam Calcium-transporting ATPase 462 658 - -
Alju12g0274 1015 Gene3D - 449 799 IPR023214 -
Alju12g0274 1015 PRINTS P-type cation-transporting ATPase superfamily signature 283 297 - -
Alju12g0274 1015 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Alju12g0274 1015 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Alju12g0274 1015 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Alju12g0274 1015 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Alju12g0274 1015 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Alju12g0274 1015 SUPERFAMILY HAD-like 451 859 IPR036412 -
Alju12g0274 1015 FunFam Calcium-transporting ATPase 771 1015 - -
Alju12g0274 1015 Pfam Cation transporting ATPase, C-terminus 839 1012 IPR006068 -
Alju12g0274 1015 FunFam Calcium-transporting ATPase 215 335 - -
Alju12g0274 1015 CDD P-type_ATPase_Ca_PMCA-like 143 887 - -
Alju12g0274 1015 FunFam Calcium-transporting ATPase 647 799 - -
Alju12g0274 1015 Gene3D - 167 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0274 Alju-ChrAlju12 3455556 3460238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0274 1 1015 Primary Pumps ATPases AT4G37640 80.906 0.0 1702