Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0268 ATGACGCAGTTCACACCAACACTACCACCTTTGCACCAAATCAGCGATAACAAGAACATTCTAGTTCCTAGGACGACGAATTCGTGGACTAAATTCCAACCATCGCAGGCACTAGGAAGCTTGGGCGATGGTAATTGCATTGAGCAGTTGCTTATTCACTGTGCCGAAGCCATAGAAGCCAATGATGTCACTCTCGCCCAACAAATCCTCTGGGTTCTCAACAACATCGCACCTCCCGACGGCGACTCCAACCAGCGTCTCGCCGCCACGTTCCTGCGTGCACTCATCGCTCGAGCCACCAAATCTGGAAGCTCCAAATTGTTAGCCGCCGTAGCCGCAAGCGCCACCCACAACAACAACATCACCACCAGCCTCGCCGTTCGAACCCACCACTTCTCGGTCATGGAGCTCACCGACTTCATCGATGTCACTCCCTGGCAACGCTTCGGCTTCACCGCCGCCAACTCAGCCATTCTAGAAGCCACGGAAGGTTTCCCCACCATCCACATCGTTGACCTCAGCTCAACACACTGCATGCAGATTCCCACCCTAATTGACGCCATCGCTTCCCGCCACGACGTCCCTCCTCTGATCAAGCTCACAATCACAGAAGCTTCTAGAAACATCCCACCTTTACTCAACCTATCCTACGACGAACTTGGCTCAAAGCTGGTCAACTTCGCCAAGTCCAAAAACATCATGATGGATTTCAGAGTGATCCCTTCCACTCACGAAGACGGTTTCGCCGCCCTGATCCAATACCTCGGATTGCACCGCCACCGTATCGTGAGGTCGGAAGCTCTGGTGATAAACTGCCATATGATGCTTCATTGTATCCCCGACGAAACTCTATCTTCGGCTAGTTCTCCTTCGTCTCTAAGATCACTGTTTCTGAAAGCGCTACGGAGATTCAACCCAACGCTTGTCCTATTGGTGGAGGAGGACGTGGATTTGACATGGAGTGATTTGGTGAGTAGGCTGAGGGCTGCGTTTAACTTTATGTGGATACCGTACGACACAGTGGAGACGTTGCTTCAAAGAGGGAGTAAGCAGAGGCAGTGGTACGAAGCGGATATATGTTGGAAGATAGAGAATGTGATAGCGCAGGAAGGGGTTGAGAGGGTAGAGAGATTGGAGAGTAGGAGTAGGTGGGAGCAGCGTATGAAGAATGCTGAGTTTCAGGGGATTGGCTTTAGTGACGACGCCGTTTCGGATGTGAAGGCCATGCTGGATGAACATGCAGCTGCGTGGGGATTCAAGAAGCAAGACCAACATCTCCTGCTCACGTGGAAGGGACATAATGTCGTTTTTGCCTCCGCTTGGTTTCCTGCTTGA 1335 0.5176 MTQFTPTLPPLHQISDNKNILVPRTTNSWTKFQPSQALGSLGDGNCIEQLLIHCAEAIEANDVTLAQQILWVLNNIAPPDGDSNQRLAATFLRALIARATKSGSSKLLAAVAASATHNNNITTSLAVRTHHFSVMELTDFIDVTPWQRFGFTAANSAILEATEGFPTIHIVDLSSTHCMQIPTLIDAIASRHDVPPLIKLTITEASRNIPPLLNLSYDELGSKLVNFAKSKNIMMDFRVIPSTHEDGFAALIQYLGLHRHRIVRSEALVINCHMMLHCIPDETLSSASSPSSLRSLFLKALRRFNPTLVLLVEEDVDLTWSDLVSRLRAAFNFMWIPYDTVETLLQRGSKQRQWYEADICWKIENVIAQEGVERVERLESRSRWEQRMKNAEFQGIGFSDDAVSDVKAMLDEHAAAWGFKKQDQHLLLTWKGHNVVFASAWFPA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0268 444 ProSiteProfiles GRAS family profile. 38 442 IPR005202 -
Alju12g0268 444 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 432 IPR005202 -
Alju12g0268 444 Pfam GRAS domain family 48 441 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0268 Alju-ChrAlju12 3370265 3371599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0268 30 443 GRAS Transcription Factor Family AT3G49950 57.177 1.00e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju12g0268 GRAS 1.5e-90 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0268 12 3370265 3371599 Alju12g0268 12 3370265 3371599 ECH