Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0242 ATGAAAGAAGGCGCAGTTGCCTTGGAAAATGAAAAATTAACACGAAACTTCACGTCTCGAATTGAAAATGAAAACCAGAAACACTGTGGACTCCATCACCTGCTAAACTCACACTCTTCTCTCACTGAAGCTTTTTGCTCACGCCACTTCCCTTCCCTCTCTATGTCTACCCAGGACCAACCACTCCTTCTTGGCCCCCGCGAGGAGGAGGAGTCGCCGGAAACCGCCTACGATTCGTCGGAGAAGATCGTGGTCGTCGGGGTTGATGACGCTGTCGCTGATTCCGATAATTTTGGTCGGGCGCCGCCGTTCTCATGGAGGAAGCTCTGGCTCTTCACTGGCCCTGGCTTTCTTATGAGCATCGCGTTTCTAGATCCTGGGAATTTGGAGGGTGATCTTCAGGCTGGTGCTATTGCTGGCTACTCACTTCTATGGCTACTCATGTGGGCGACGGCTATGGGGCTTCTCGTTCAGCTTTTGTCTGCTCGGCTCGGCGTCGCCACCGGAAGGCACTTGGCTGAGCTCTGCAGAGACGAGTACCCCACGTGGGCCAGATTGGTGCTCTGGATTATGGCGGAGGTGGCTTTAATCGGGGCTGACATTCAAGAGGTTATTGGAAGTGCGATTGCTATTAGGATTCTAAGTAACGGATTTGTGCCTCTCTGGGCTGGGGTCGTCATCACAGCTTTTGATTGCTTTATCTTTCTTTTTCTGGAGAACTATGGTGTAAGGAAGTTGGAAGCACTTTTTGCGGTTCTCATTGGTGTTATGGCGCTTTCATTTGCGTGGATGTTCGGCGAAGCAAAGCCCGATGGTTTAGATATTCTTCTAGGTCTTTTGGTTCCAAAACTTAGTTCCAGAACAATACGGCAGGCTGTTGCGGTTGTAGGCTGCATTATCATGCCTCACAATGTGTTCTTGCACTCTGCTCTTGTTCAATCGAGACAGATTGACTCAAGCAAGAATGGGCGAGTTCAAGAAGCTCTTAATTATTATACTATCGAATCCACTGCTGCACTTGCCGTCTCCTTAGTCATTAACATATTTGTCACAACTGTGTTTGCCAAGGGTTTCTATGGTACTGAACTAGCAAATTCCATTGGTCTTGAAAATGCAGGGCAGTATCTTCAGCAGAAGTATGGTGGTGGACTTTTTCCAATCTTATATATATGGGGTATCGGGTTACTAGCAGCTGGGCAAAGCAGCACCATCACTGGCACTTATGCCGGACAATTTATTATGGGGGGTTTTCTGAATCTAAGGTTGAAAAAATGGATGAGGGCTTTAATTACACGAAGTTTTGCTATCATCCCAACCATAATCGTTGCTCTTGTCTTTGATACCTCTGAGGACTCATTAGATGTCCTAAACGAATGGCTCAATATTCTTCAGTCAGTTCAAATTCCTTTTGCCCTTATTCCCTTGCTTTGCTTGGTGTCCAAGGAGCAGTTGATGGGGACTTTCAGGATTGGCATTGTCCTTAAGATTATTTCCTGGTTTGTGGCTGCTTTAGTGATGGTCATTAACGGCTATCTGTTGGTGGAATTCTTCTCCTCTGAAGTGAACGGACCAGCGGTTGGCACCATAGTGTTTGCATTTACAGTCATCTATGTTGCGTTCATAATCTACCTCGCTTCACGAATGATCACCTTCTTGCCGTGGCAGAGATTTTCGCAAATCAAGGCAAACACGAATACAGAATTGACGAGTTGA 1713 0.4676 MKEGAVALENEKLTRNFTSRIENENQKHCGLHHLLNSHSSLTEAFCSRHFPSLSMSTQDQPLLLGPREEEESPETAYDSSEKIVVVGVDDAVADSDNFGRAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCRDEYPTWARLVLWIMAEVALIGADIQEVIGSAIAIRILSNGFVPLWAGVVITAFDCFIFLFLENYGVRKLEALFAVLIGVMALSFAWMFGEAKPDGLDILLGLLVPKLSSRTIRQAVAVVGCIIMPHNVFLHSALVQSRQIDSSKNGRVQEALNYYTIESTAALAVSLVINIFVTTVFAKGFYGTELANSIGLENAGQYLQQKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTIIVALVFDTSEDSLDVLNEWLNILQSVQIPFALIPLLCLVSKEQLMGTFRIGIVLKIISWFVAALVMVINGYLLVEFFSSEVNGPAVGTIVFAFTVIYVAFIIYLASRMITFLPWQRFSQIKANTNTELTS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0242 570 PRINTS Natural resistance-associated macrophage protein signature 188 214 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 PRINTS Natural resistance-associated macrophage protein signature 218 237 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 PRINTS Natural resistance-associated macrophage protein signature 292 315 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 PRINTS Natural resistance-associated macrophage protein signature 461 480 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 PRINTS Natural resistance-associated macrophage protein signature 243 264 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 PRINTS Natural resistance-associated macrophage protein signature 427 444 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 Pfam Natural resistance-associated macrophage protein 130 491 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 NCBIfam Nramp family divalent metal transporter 114 484 - -
Alju12g0242 570 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 86 546 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 107 485 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju12g0242 570 Hamap Divalent metal cation transporter MntH [mntH]. 95 517 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0242 Alju-ChrAlju12 3083188 3086165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0242 89 554 Inorganic Solute Cotransporters AT2G23150 79.399 0.0 765
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2061 09 44263536 44266540 Alju12g0242 12 3083188 3086165 CCT
Alju12g0242 12 3083188 3086165 Alju12g0242 12 3083188 3086165 ECH