Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0239 ATGACGTTCTTCAAGGAGGAGGAGGAAGAAGAAGTGGTGGTGAATAAGGTATCTGCTGCAGGATCAGTATCAATGAACAAAGAAGAAGAAGAAGAAGAAGTTGAATCAGAGGGAATAGGAGAATGGTTGAGTTTAGGACTCAACATATCTGAGAAACCTCAGAACATGGAGGAGGACTCTGAAATATCAAAATCATTGCAGAACAACAACAATAATAAGGTATTCTCATGCAATTTCTGCTTGAGAAAGTTTTACAGTTCACAAGCCTTAGGAGGTCACCAGAATGCTCACAAGAAGGAAAGAGGAGAAGCAAGAAGGAACCAATCTCAGAGAACGATGACAGCGGCGGCCGGGGCGGCGGCAAGGTCACTGGGTGTGCAGCCGCACTCACTAGTGCACAAGCCAAACAGAGAAGGGTCAAGCATGGTGGCTCGATTCAGTCATGGGTTTCAAATGGCATATTGGATGCCATTTCTGGTACAACAAGGTGTGGATTTGAGTTGGCCAGGAAGTTTTCGTGTGGATTTGCCAAAACAAGAATCCCATGTAAATAATAATAAGCTTGACTTAGATCTTCGCCTCTGA 585 0.4427 MTFFKEEEEEEVVVNKVSAAGSVSMNKEEEEEEVESEGIGEWLSLGLNISEKPQNMEEDSEISKSLQNNNNNKVFSCNFCLRKFYSSQALGGHQNAHKKERGEARRNQSQRTMTAAAGAAARSLGVQPHSLVHKPNREGSSMVARFSHGFQMAYWMPFLVQQGVDLSWPGSFRVDLPKQESHVNNNKLDLDLRL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0239 194 Gene3D Classic Zinc Finger 50 125 - -
Alju12g0239 194 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Alju12g0239 194 PANTHER ZINC FINGER PROTEIN 4-LIKE 4 194 - -
Alju12g0239 194 SUPERFAMILY beta-beta-alpha zinc fingers 71 101 IPR036236 -
Alju12g0239 194 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0239 Alju-ChrAlju12 2978879 2979463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0239 63 173 C2H2 Transcription Factor Family AT1G24625 43.697 1.39e-23 91.3