Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0233 ATGAAACCTCCTCGTATCATCTCCATGTTTTCTTTCCTCCTCCTCCTTCTTCAATTCTCCTCCTCGATGGCTTCAGCCTACTCTGTTCCCGATAAGTATTTCATCAATTGCGGTTCTGATTCCACCGTAGAAGACGGCGGCGGTCAGGTTTTCTTCGGTGACGACTCTACTGCTTCCGTCTGCTTTCCAAAATGGAGCTCCACCGTGAAGGAACTTAATAATTCGTCAACCACACCTCCCCTGTATCAAACCGCGAGAATCTTTCATGTTCCATCTGGTTACAAGTTCACAATCGGCAAAAATGAAGGCGGATATTATCTGGTACGTCTCCATTTCTATGCCTTTTCGTCTCGAGAAACACTATCTAGTGCTCGATTCAATGTTTCCAGTGGCGGATTCTTGTTGTTGGAAAATTTCAGTACTGGAAATAAAACAAACTCTCCTTTTGTAAAGGAGTTTTATCTGAACATCAGAGGCAACACGAACCTGCAAATCGATTTTTTCCCAGAGAAATCAAAATTGGCATTTGTAAACGCCATAGAACTGTTTCGAATCCCTGATAACTTTATCCCCAATATGGCATCACATGTTACTAGCAAAGGAAATACCAGTGATTACAAGAGCATTCACTCCTGGGTGTTAAGTACGAGGTACAGGCTCGATGTTGGTTATTCTGGTCGTTCCGAGGAATCGTACGATATCTTGCGGAGAAGATGGTGGGAAAAAGATGATCCATACGCTAAAAATGGAACAGCGTTTTCTAGCTCTGTTGCTATTAAGTACGACGTCCAAGGAGGAGATAATAATAATGGTTCGGAAGAAAGTGGAGAAGATGGTGTGGCTTCCACTAATGTTACAGCCCCAGATATTGTTTACCGGACAGCCAGAGTGATGACTTCAGAATCAGGCAATGTTGATAAATTTTTTAACGTATCATGGACACTTCAGGTGAAGAGGAATGTTAGTTATTTCATTCGAGCTCACTTTTGTGACCTTACCAGTATGAGCGCTGGTCTTACATACTTCAATTTCTATATCTATGACAACTTCAATTGGTCGGTCCGTACCGATTTGTGGGGGTTTTCTGTTCCTATTTATCGTGATTTTGTTGTCGATTCTGATGACTCTGGAAATTTGAGGATAAGTGTTGGTCCTGATGAATCATCTACCGTTAAGAATGCTTTCTTGAATGGTCTTGAAGTGATGGAAATCATTAAAACTCGAGGTCAACCTGCAAAAGTAGACGGTTACCTTTGTAAGAAGGAAAGTCACATTCATCTTGTTCTAGATTTGGTGCTTGGATCATTGGCCCTGATTATCTTTATGGTGGTTGTGTTCTGTTTGATCTGGAAATATAGGAAATCAGAGATTATTAGAAATCTGGATTGGGCCCCACTTTCAGTTCAAGGAGGAGGAAGTTCACATGGCAAAAGAGGAAGCAGCCATGGTTCATCTCTTGGCAACTTAAAACTTGGACTGAAGATGTCTTTCAACGAGATTCAATCTGCAACAAACAATTTTAACAAAAAACGGATTATTGGCAAGGGAGGATTTGGAAATGTGTACAAGGGAATTCTCAAGAATGGTGTGAAAGTAGCTGTGAAGAGAAGTGAACCAGGTTCAGGGCAAGGATTCCCAGAATTCCAAACTGAGATCATGGTATTGTCCAGAATTCGCCACCGTCATCTTGTTTCCTTGATCGGGTACTGCGACGAGAGGTCAGAGATGATTCTGGTTTATGAGTACATGGAAAAAGGAACACTCAGAGATCACTTGTACGATTCAAATCTACCAAGCTTAAGCTGGAAGGAGAGGCTCGAAATCTGCATTGGAGCAGCACGAGGTCTGAACTATCTCCACAAAGGAGCAGCCGGCGGAATCATCCACCGTGACGTGAAGTCAACAAACATATTGCTCGACGAAAACCATGTCGCCAAGGTTGCCGATTTCGGCCTGTCAAAAACAGGTCCACTTGATCATCAACAACCATCAGTGACCACAGGTGTTAAGGGCACATTTGGGTATCTTGATCCTGAATATTTCAGAACCCAACAGTTAACAGAAAAATCTGATGTTTACTCATTCGGGGTAGTTCTTTTGGAAGCGTTATGTGCAAGACCAGCACTTGATCCTACACTTCCATGGAACCAAGTGAACTTAGCTGACTGGGGAATGTTCTGCAAGCGAAGAGGGACATTAGAACAGCTGATAGATCCGAGGATAAAGGACCAGATAGATCCCAACTCGCTGAGGAAGTTCAATGAGACAGTGGAGAAATGTCTGGAAGAAGAAGGGAGTGAGAGACCAACAATGAGTGATGTGTTGTGGGATTTGGAATATTCACTGCAACTTCAGAGAGGAGCGAGAAAGAGGAACTTGACAGGAGAGGATAGTAACAATACATGTACAGGAGCATCAATTGAACTGTCCAACGTAAGACGTCTTCCTTCACTGTCGACACAAGTTGATTCAGAGGAGATGTCTATTTTAAGCGATGCTAGTGCAGCTCACTCTATTTTCTCTTTGTCCAATTTTCGTCATGGTACCAAATAA 2553 0.4262 MKPPRIISMFSFLLLLLQFSSSMASAYSVPDKYFINCGSDSTVEDGGGQVFFGDDSTASVCFPKWSSTVKELNNSSTTPPLYQTARIFHVPSGYKFTIGKNEGGYYLVRLHFYAFSSRETLSSARFNVSSGGFLLLENFSTGNKTNSPFVKEFYLNIRGNTNLQIDFFPEKSKLAFVNAIELFRIPDNFIPNMASHVTSKGNTSDYKSIHSWVLSTRYRLDVGYSGRSEESYDILRRRWWEKDDPYAKNGTAFSSSVAIKYDVQGGDNNNGSEESGEDGVASTNVTAPDIVYRTARVMTSESGNVDKFFNVSWTLQVKRNVSYFIRAHFCDLTSMSAGLTYFNFYIYDNFNWSVRTDLWGFSVPIYRDFVVDSDDSGNLRISVGPDESSTVKNAFLNGLEVMEIIKTRGQPAKVDGYLCKKESHIHLVLDLVLGSLALIIFMVVVFCLIWKYRKSEIIRNLDWAPLSVQGGGSSHGKRGSSHGSSLGNLKLGLKMSFNEIQSATNNFNKKRIIGKGGFGNVYKGILKNGVKVAVKRSEPGSGQGFPEFQTEIMVLSRIRHRHLVSLIGYCDERSEMILVYEYMEKGTLRDHLYDSNLPSLSWKERLEICIGAARGLNYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSKTGPLDHQQPSVTTGVKGTFGYLDPEYFRTQQLTEKSDVYSFGVVLLEALCARPALDPTLPWNQVNLADWGMFCKRRGTLEQLIDPRIKDQIDPNSLRKFNETVEKCLEEEGSERPTMSDVLWDLEYSLQLQRGARKRNLTGEDSNNTCTGASIELSNVRRLPSLSTQVDSEEMSILSDASAAHSIFSLSNFRHGTK 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0233 850 SMART serkin_6 507 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0233 850 FunFam receptor-like protein kinase FERONIA 473 582 - -
Alju12g0233 850 Pfam Malectin-like domain 35 403 IPR024788 -
Alju12g0233 850 Gene3D Transferase(Phosphotransferase) domain 1 583 801 - -
Alju12g0233 850 CDD STKc_IRAK 513 779 - -
Alju12g0233 850 Gene3D - 32 185 - -
Alju12g0233 850 Gene3D - 215 405 - -
Alju12g0233 850 Gene3D Phosphorylase Kinase; domain 1 476 582 - -
Alju12g0233 850 PANTHER OS07G0166700 PROTEIN 494 785 IPR045272 GO:0004714|GO:0006468
Alju12g0233 850 FunFam Receptor-like protein kinase FERONIA 583 800 - -
Alju12g0233 850 Pfam Protein tyrosine and serine/threonine kinase 509 775 IPR001245 GO:0004672|GO:0006468
Alju12g0233 850 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Alju12g0233 850 ProSiteProfiles Protein kinase domain profile. 507 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0233 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Alju12g0233 850 SUPERFAMILY Protein kinase-like (PK-like) 494 776 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0233 Alju-ChrAlju12 2902755 2905307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0233 13 807 Receptor kinase-like Gene Family AT2G23200 46.806 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Alju12g0233 Malectin_like 2.3e-32 CL0202