Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0218 ATGCCTCATTTCAAAACTCTCTTTCATCTCTTCTTCTTTTGCTTCACTCTCACCACCGTCTTCTCTGATCAATCTTCTCCGGCTTCCTCCAATCTGGTCCTCTCCTCCGACGCCGTTTCATTGCTCGCTTTCAAGTCCAAAGCCGACCTCGACAACAAGCTTCACTATGCTCTTCACGAGCGCTTCGATTACTGTCAGTGGCAAGGCGTCAAGTGCGCCCAGGGCCGAGTGGTTCGCTTCTTCCTTCAGGGCTCAGGCCTTCGCGGCGTCTTTGCTTCCGGTACCCTCTCTCGCCTCGACCAGCTTCGAGTCCTCTGCCTCCGCAATAACTCCCTCTTTGGTCCCATCCCCGATCTCTCTCCCCTCTTCAACCTCAAAGGTCTCCTTCTCGACCATAATTTCTTCTCTGGTTCGTTACCTCCCTCGTTTCTTTTGCTTCATCGCCTTCGCACTCTTTCTCTCTCTTATAACAACCTCACTGGTTCGATCCCTGTCGAGTTAGTTAGTTTGGACCGTTTAGTAACCCTCCGTCTTGATTCGAACCGTTTTAATGGAACCGTTCCGCCGTTGAACCAGTCCTCCCTTCGGATCTTTAATGTCTCCGGCAATAACCTCACAGGGCCGATTCCGGCAACTCTTACTCTGGCTCGATTCCACACGGCGTCCTTTTCGGGGAATCCGGGTCTATGCGGTGACATTATTTCCAAAGCGTGTGATCATCCTCGGCCTCCAATACTTGGTTCTTCCAATGCCCCTGTCTACTTGGGGCAAAGCGCTGAATCACAGGGAAACATCGTCGTTTCTTCGCTGAATAGAAAGGAGCATAAGAGTAATGGCTTGATTCTTGGGTCCACCATTGGTGCGTTGATTCTAATCGCGTCTTTTCTCGGGTTTATCGCGATGGTTAGGAAACGAAGTGTTTCAAGTAAATCAGAACGCCCAACAATGGCGGCAATGGGACCTATGGATGCTCGGTCGGGGAAGAAAATAGAGGAAATCGATGGAGTTGATAATTTTAATAGAGAGAATTTGGTGTTCTGTTGTGGGGAGGCACAATTGTATACGCTGGATCAGTTGATGAGAGGGTCGGCCGAGTTACTGGGAAGGGGTACAATTGGGACCACGTACAAAGCAGTGGTGGATGGGAGCTTCATTTTGACAGTAAAGAGGCTAGATGCTGGGAAGACTGCAAGAACAAGTGGTTATTTTGAGAGGCACATGGAAATGGTGGGTCAGCTTCGGCATCCAAATTTAGTACCAGTCAGAGCTTATTTTCAGGCTGAAGCAGAGAGGCTGGTGATCTATGATTATCAATCTAACGGCAGCCTCTTCAACCTCATTCATGGTTCAAGATCAGCAAGAGCAAAGCCTCTTCACTGGACATCATGCTTGAAGATAGCTGAAGACATAGCTCATGGACTTGCATATATCCACCAAACATCAAGATTAATCCATGGCAACCTAAAGTCCTCTAACGTCCTTCTTGGAGTGGACTTCGAAGCTCGTGTTACAGACTACAGCCTGTCCCTCCTTGCAGACTCTTCATCCAGTGATGATCCTGATTCTGCTGCCTGTAAAGCACCTGAAATTCGCAACACTAATCGCCTACCTACTTCTAAATCCGATGTCTATACATTTGGGGTACTTCTACTGGAGCTTCTAACTTCCAAATACCCTTCTCAGCATCCCTTCCTTGTGCCTATGGATCTGCAGGATTGGGTCAAAGCAATGAGGAATGACTACGGTGCTGAAGATAAGCAGCTAGGAATGCTTACAGAGGTCGCGAGTATTTGCACTGTTATATCACCTGAGCAGAGACCAGCTATGTGGCAAGTCTTGAAGATGATACAGGAAATTAAGAAGAGTGTAACATTTGAAGGTAATATATCTACTGGGTTTATATAG 1905 0.4777 MPHFKTLFHLFFFCFTLTTVFSDQSSPASSNLVLSSDAVSLLAFKSKADLDNKLHYALHERFDYCQWQGVKCAQGRVVRFFLQGSGLRGVFASGTLSRLDQLRVLCLRNNSLFGPIPDLSPLFNLKGLLLDHNFFSGSLPPSFLLLHRLRTLSLSYNNLTGSIPVELVSLDRLVTLRLDSNRFNGTVPPLNQSSLRIFNVSGNNLTGPIPATLTLARFHTASFSGNPGLCGDIISKACDHPRPPILGSSNAPVYLGQSAESQGNIVVSSLNRKEHKSNGLILGSTIGALILIASFLGFIAMVRKRSVSSKSERPTMAAMGPMDARSGKKIEEIDGVDNFNRENLVFCCGEAQLYTLDQLMRGSAELLGRGTIGTTYKAVVDGSFILTVKRLDAGKTARTSGYFERHMEMVGQLRHPNLVPVRAYFQAEAERLVIYDYQSNGSLFNLIHGSRSARAKPLHWTSCLKIAEDIAHGLAYIHQTSRLIHGNLKSSNVLLGVDFEARVTDYSLSLLADSSSSDDPDSAACKAPEIRNTNRLPTSKSDVYTFGVLLLELLTSKYPSQHPFLVPMDLQDWVKAMRNDYGAEDKQLGMLTEVASICTVISPEQRPAMWQVLKMIQEIKKSVTFEGNISTGFI 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0218 634 Gene3D Phosphorylase Kinase; domain 1 362 437 - -
Alju12g0218 634 Gene3D Ribonuclease Inhibitor 193 241 IPR032675 -
Alju12g0218 634 ProSiteProfiles Protein kinase domain profile. 361 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0218 634 Gene3D Ribonuclease Inhibitor 35 192 IPR032675 -
Alju12g0218 634 FunFam Probable inactive receptor kinase At5g67200 36 146 - -
Alju12g0218 634 Pfam Protein tyrosine and serine/threonine kinase 365 614 IPR001245 GO:0004672|GO:0006468
Alju12g0218 634 SUPERFAMILY Protein kinase-like (PK-like) 365 621 IPR011009 -
Alju12g0218 634 Gene3D Transferase(Phosphotransferase) domain 1 439 629 - -
Alju12g0218 634 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 621 IPR046959 -
Alju12g0218 634 FunFam Leucine-rich repeat receptor-like protein kinase 148 240 - -
Alju12g0218 634 SUPERFAMILY L domain-like 48 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0218 Alju-ChrAlju12 2686506 2689342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0218 34 625 Receptor kinase-like Gene Family AT3G50230 54.167 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju12g0218 PK_Tyr_Ser-Thr 4.8e-28 CL0016