Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0199 ATGTCTTGGGTTCGAGGGAACTTCATCGGAAGAGGAAGCTTCTCCACTGTTCACCTAGCAGTACCAACCTCTGAGATTGCTTCCCCCACCGCTGTTAAATCGTCGGAGGTTTTGTCCTGTTCTTTTCTCAAGAACGAGAAGGAGATTCTGGATTGTCTTGGATTTTGTCCACAAATTATACAGTGTTCTGGGGATGGATTTAGCTTCGAGAATGGTGGGAAGTATTATAATTTGTTTTTGGAATATGCCGCCGGTGGTAACCTTGCAGAACACATCAAGAAACATGGCAGTCGGTTGCCGGAGGCCGATGTCCGGAGGTACACGATGTCGATTGTGAAGGGAATTCAGCATATACACGCGAAAGGATTTGTTCACTGTGATATCAAGCTTCAGAACATTCTTCTGTTCGACAATGGAGATGTCAAAATTGCAGATTTTGGCCTCGCGAAGAGAACAGGGGAGAGACAAGAAAAACAGAGCAGGGAAGAGAAACAGAGTGAATGGAGGGGAACTCCTCTGTTTATGTCGCCGGAGTCGGTGAGAGACAACGTGTATGACTCTCCAGCGGATATATGGTCTCTCGGCTGTGCTGTGGTGGAGATGATGACCGGAAAACCCGCCTGGATTAACCCGAACGGGTCGGAATTGAGTAATATTTATTCACTGTTGCTTCGAATTGGGGTCGGAGAAGAACTGCCGGAAATTCCAGAGGAGTTATCAGAAGACGGGAAGGATTTTCTGAGGAAGTGTTTGGTGAAGGATCCGGCGAAGAGATGGACGGCGGAGATGCTTTTGGAGCATCCCTTCATAAAGCAGGACGGTGAAGAAGAATCGTCGCCGAGAACTCACTTCGATTTTCCAGATTGGGTTTCGAGCACGAGTAGTTTGGCTCCGAATTCGCCGGAATCTGACGAGTGGCGTGAATGGAAATTTGATATGTCGTCGAATGTTACTAGTTTCTGTTCACCGGCTGATCGGCTGCGACAAGTGTTGACGGATGAGAGACCAAATTGGTCGGAATCGGAATCTGAAAGTTGGGAGGTTGTTAGGTGA 1053 0.4777 MSWVRGNFIGRGSFSTVHLAVPTSEIASPTAVKSSEVLSCSFLKNEKEILDCLGFCPQIIQCSGDGFSFENGGKYYNLFLEYAAGGNLAEHIKKHGSRLPEADVRRYTMSIVKGIQHIHAKGFVHCDIKLQNILLFDNGDVKIADFGLAKRTGERQEKQSREEKQSEWRGTPLFMSPESVRDNVYDSPADIWSLGCAVVEMMTGKPAWINPNGSELSNIYSLLLRIGVGEELPEIPEELSEDGKDFLRKCLVKDPAKRWTAEMLLEHPFIKQDGEEESSPRTHFDFPDWVSSTSSLAPNSPESDEWREWKFDMSSNVTSFCSPADRLRQVLTDERPNWSESESESWEVVR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0199 350 SUPERFAMILY Protein kinase-like (PK-like) 3 306 IPR011009 -
Alju12g0199 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Alju12g0199 350 ProSitePatterns Protein kinases ATP-binding region signature. 9 33 IPR017441 GO:0005524
Alju12g0199 350 Pfam Protein kinase domain 6 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0199 350 SMART serkin_6 3 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0199 350 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 321 - -
Alju12g0199 350 ProSiteProfiles Protein kinase domain profile. 3 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0199 350 Gene3D Transferase(Phosphotransferase) domain 1 2 319 - -
Alju12g0199 350 CDD STKc_MAPKKK 2 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0199 Alju-ChrAlju12 2431025 2432077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0199 1 341 MAP Kinase Kinase Kinase AT4G36950 51.136 2.21e-111 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju12g0199 Pkinase 4.7e-57 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2123 09 44762869 44763930 Alju12g0199 12 2431025 2432077 CCT
Alju12g0199 12 2431025 2432077 Alju12g0199 12 2431025 2432077 ECH