Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0197 ATGGAGGTGGATGACAGAAGCATGGACATGATGGCAATGATGATGCAAATGGAAAAGTTTCCTGAATTCTCTGAACCTTTTTACCCAGAACCTCCATTAATCTCCACCACCAACAACAACAACAACACTATGCCCATACTCTCCAATAACATGATCAATAATAATAATCCCTTTGTGACCAACAACACTATTAATCCAATCCCACAAGTTGTGACCCCACACCACCTCATTCATCAACCCAACACTATTATTAACCCCAATGCTTCTTATTCCTCTTCTTCTTCTGAGAAGAAGAATTCTATGGCGGCCATGAGAGAGATGATATTTCGAATAGCGGTGATGCAGCCAATTCACATAGACCCAGAAGCCATTAAGCCTCCAAAGAGAAGGAACGTGAAGATATCGAAGGATCCTCAAAGCGTGGCGGCAAGGCACCGGAGGGAGAGAATAAGCGAGAGAATTAGGATTTTGCAGAGATTAGTACCTGGAGGGACTAAAATGGACACGGCCTCGATGTTGGACGAAGCTATACATTATGTTAAGTTCTTGAAGAAGCAAGTTCAGACGCTGGAACAAGCTGGAGCTAGTAGAGCTACTGTGGGTTTTGGGGTACCTACTAGCTTCACTAATATGAATAATAATAATTATTCTAATACCTTATTGAAGGGTTATAATTACCATCAACCTTCTCATCAGATGGTGGCTAGTTCTATGCAAATGCTAAGCTGA 729 0.4184 MEVDDRSMDMMAMMMQMEKFPEFSEPFYPEPPLISTTNNNNNTMPILSNNMINNNNPFVTNNTINPIPQVVTPHHLIHQPNTIINPNASYSSSSSEKKNSMAAMREMIFRIAVMQPIHIDPEAIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRATVGFGVPTSFTNMNNNNYSNTLLKGYNYHQPSHQMVASSMQMLS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0197 242 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 37 240 IPR045843 GO:0003700|GO:0006355
Alju12g0197 242 FunFam BHLH transcription factor 137 200 - -
Alju12g0197 242 Pfam Helix-loop-helix DNA-binding domain 143 183 IPR011598 GO:0046983
Alju12g0197 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 193 IPR036638 GO:0046983
Alju12g0197 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 183 IPR011598 GO:0046983
Alju12g0197 242 Coils Coil 173 193 - -
Alju12g0197 242 Gene3D - 133 200 IPR036638 GO:0046983
Alju12g0197 242 SMART finulus 140 189 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0197 Alju-ChrAlju12 2403279 2404007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0197 17 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 61.376 6.76e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju12g0197 HLH 1.4e-06 No_clan