Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0155 ATGGCGAACCCAAGATGCTACCTGGACATAAGCATTGGAGGAGAGTTAGAGGGTAGGATTGTGGTTGAGCTCTTCAAAGACGTCGTCCCCAAGACTGCTGAGAATTTCAGGGCTCTTTGTACTGGTGAGAAGAGCCTCGGTCCCAACACCGGAGTTCCCTTGCATTACAAGGGAGTCCGTTTTCATCGCGTCATTAAAGGTTTCATGGTGCAAGGTGGAGATTTCTCAGCTGGCAATGGCACTGGAGGAGAATCCATTTATGGTTTGAAATTTGAGGATGAGAATTTTGAGTTGAAACATGAGAGGAAAGGGATGCTGTCGATGGCTAATGCGGGTCCCAACACCAATGGATCACAATTTTTCATTACTACTACTCGGACTCCTCATTTGGATGGAAAGCACGTAGTGTTTGGGAAAGTGATAAAAGGAATGGGTGTTGTGCGGTCTATCGAACATGTTACCACTGGGGAAGGTGACTGTCCCGCCCAAGATGTCATCATTGCTGATTGTGGAGAAATAGCTGAAGGAGATGATGATGGAACCATAAACTTCTTTAAAGATGGCGATACTTATCCTGATTGGCCAGCTGACCTAAGTGGAAAGCCAGATGAAATTTCTTGGTGGATTGAGGCTGTTGATTCTATCAAAAGTCTAGGAAATGAACAGTATAAGAAGCAAGATTTGAAGTCTGCTCTTCGGAAGTATCGTAAAGCTTTGCGCTATTTGGATGTTTGCTGGGAAAAGGATGACATTGATGAAGAAAAGAGCACTGCTTTAAGGAAGACAAAATCTCAAATTTTTACCAACAGTTCTGCTTGTAACTTGAAATTAGGCGATCCAGAAGGAGCATTGATGGATTCAGATTTTGCATTGCATGATGGAGATAGTGCAAAGGCCCTGTTCCGCAAAGGCCAGGCATGCATGGCACTCAATAACCTGGATGCTGCCGTTGAAAGCTTAAAAAAAGCACTAGAGTTGGAGCCAAACGATGGAGGAATTAAGAAAGAACTTGCAGCTGCAAGGAAAAAGGTTGCTGATAGACGTGACGAAGAGAAAAAAACTTATTCCAGAATGTATGAGACAGCAAATCAGCCAAGCCCAACTTGGATTGTGTTTTTGATGTTGAGTTTGTTAGAATTTAATACGAGGTTAATTGCTGTCTGTAACTTGAATGCTGATTCATGTAATATGGAGACAAATATATGCTGA 1209 0.4285 MANPRCYLDISIGGELEGRIVVELFKDVVPKTAENFRALCTGEKSLGPNTGVPLHYKGVRFHRVIKGFMVQGGDFSAGNGTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTPHLDGKHVVFGKVIKGMGVVRSIEHVTTGEGDCPAQDVIIADCGEIAEGDDDGTINFFKDGDTYPDWPADLSGKPDEISWWIEAVDSIKSLGNEQYKKQDLKSALRKYRKALRYLDVCWEKDDIDEEKSTALRKTKSQIFTNSSACNLKLGDPEGALMDSDFALHDGDSAKALFRKGQACMALNNLDAAVESLKKALELEPNDGGIKKELAAARKKVADRRDEEKKTYSRMYETANQPSPTWIVFLMLSLLEFNTRLIAVCNLNADSCNMETNIC 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0155 402 FunFam Peptidyl-prolyl cis-trans isomerase D 1 178 - -
Alju12g0155 402 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 171 IPR002130 GO:0000413|GO:0003755
Alju12g0155 402 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 173 - -
Alju12g0155 402 Gene3D Tetratricopeptide repeat domain 208 361 IPR011990 GO:0005515
Alju12g0155 402 CDD cyclophilin_ABH_like 4 171 - -
Alju12g0155 402 FunFam peptidyl-prolyl cis-trans isomerase D 210 360 - -
Alju12g0155 402 SUPERFAMILY TPR-like 210 357 IPR011990 GO:0005515
Alju12g0155 402 SUPERFAMILY Cyclophilin-like 2 173 IPR029000 -
Alju12g0155 402 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 172 IPR002130 GO:0000413|GO:0003755
Alju12g0155 402 Gene3D - 1 179 IPR029000 -
Alju12g0155 402 ProSiteProfiles TPR repeat region circular profile. 297 330 - -
Alju12g0155 402 SMART tpr_5 297 330 IPR019734 GO:0005515
Alju12g0155 402 SMART tpr_5 212 245 IPR019734 GO:0005515
Alju12g0155 402 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Alju12g0155 402 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Alju12g0155 402 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Alju12g0155 402 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Alju12g0155 402 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Alju12g0155 402 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 IPR020892 GO:0003755|GO:0006457
Alju12g0155 402 Pfam Tetratricopeptide repeat 297 330 IPR001440 GO:0005515
Alju12g0155 402 ProSiteProfiles TPR repeat profile. 297 330 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0155 Alju-ChrAlju12 1891722 1895915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0155 17 170 U-box Gene Family AT5G67530 43.226 1.01e-32 127