LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju12g0140	ATGTATAGGAATGAGAGTGAGAGATTAGACCAGTGGAGTCGTCTCTATGAATATTCAGTTTCAAATGATGGCTTTAAGTTTGATGCCAGCCATATTAAACAGGTACTTGATGGAATCAGTGTTGCCATGGAACGACCGTGGAACTTGAAGCAGGAACTGACGTCTTCTGTAGCAATCATGTTACGCGGCACACAGAAGGCTGTTTCTAATTTTAACCGTTTAACTGACGTCTCCGGTGAGAGAGATATTGGCCTTGGGCTTACGAAGAGACCATCATCCTTCTTATGGAAAACAGTTTCAAGATTTGAGAAGCATCTTGGTGAATGCCGCCGGTGGATTGAAGAGTTGGAGCGACTTCTCGGAAACTCCGAGAGACACACTTCCAGTAATGGATCCTTCTCATGGCAGTTTCTTCATGAAGTCATGGCAAATGTACACGACTTTTTTATCCGTGTGGCTGCAAAGGTGGAGAGCGGCATTCATCAGCACATGGATGACGTGAGATCAACATACCTAGTTAAACATCGCCGCCGGCAAGAGAAGTATGATCCATTTCGAGTAGCTGACCAGCGTGATACAGCAAGAAAAGAAGGTTCCTCAAAAAGACTTCGTCCAACATTGCATTCACCTGAAGTTTCACAACCATCAACAGAACTTGCCGGGTTATTTTTAAGTTCTGGAACAGTATGGGCATCAACTGCCCCACAAGCATCTCCACTAACTTCAAATTCTTTAGGAAGTGGCCTCTCAGTTTTTAGCATGCCTTTTTTAGTTCCATCTATATCTGCTTCCCCCCAAACATCTCCACTAACTTCAAATTCTTCAGGAAGTGGCCTCTCATTTTTCAGCACTCCTTATTCAGTTCCATCTTCATCTGTTGCCCCACAAACTTCAAATTCTTCAGGGAGTGGCTTCTCATTTTTTAGCATGCCTTGTTCAGTTCCATCTTCAACTGCTGCCTCACAAACATATCCACTAACTTCAAATTCTTCAGGAAGTGGCCTCTCATTTTTCAGCACGCCTCATTCAGTTCCATCTTCATCTGTTGCCCCACAAACATCTCCACTAACTTCAAATTCTTCAGGAATTGACCTCTCAGATTTTAGCATGCCTTATTCAGTTCCATTCTCATCTGCTGTCCCACAAACATATCCACTAACTTCAAAATCTTCAGGAAGTGGCCTCTCAGGTTTTGGCATGCCTTCTTCAGTTCCATCTTCTTCTGTGCCAGCTTTGTATATGACCCCAACAACTTCTGCTCAAGAATTTCCTTTGTCTGGATCGTCAAGTGGTACATCCTGCCCAGAAAGGGTGTTGGAAGTTGTCCATCAAGCAAGTATGGAGAGTTCTATACCAAGTGCTAGGACCCAAACCTCACTTGTATATTCTATTTCTGGAACATTAGAGGCACCAACTGCCACACAAACATCCTACAGAAGAGGCAGATTTACAGTCTGTGATGTAATTAGGACACCAAATGCTACATCCCAAGTCTCACTTTTAAATTCTTCATCAAATTCCTTGTTTGGTTCCACTCCCTCTCAGTTTGTTGGTACTGATCCATCACGTGGTACAACTTCTGGAGGATCAACCTCTTCTTCACCTTCATTTTCTCCAGAAATTATGACACCAAGTGCTACATCCCAAGCCTCACTTTTAAATTCTTCATCAAGTTCCTTGTTTGGTTCCACTCCCTCTCAGTTGGGTGGTACTGCTCCATCACGTAGTACAACTTCTGGAGCATCAACCTCTGCTTCACCTTCATTTTCTCCAGGTCCTGCAACAGGAACAGGGACAGCCTCTACATCACCATTAAAACGGCCAAGGTCTAGAACAAATTTATCAGAAGGCGACAGTAGTGGTCAGAGTGAATAA	1875	0.4357	MYRNESERLDQWSRLYEYSVSNDGFKFDASHIKQVLDGISVAMERPWNLKQELTSSVAIMLRGTQKAVSNFNRLTDVSGERDIGLGLTKRPSSFLWKTVSRFEKHLGECRRWIEELERLLGNSERHTSSNGSFSWQFLHEVMANVHDFFIRVAAKVESGIHQHMDDVRSTYLVKHRRRQEKYDPFRVADQRDTARKEGSSKRLRPTLHSPEVSQPSTELAGLFLSSGTVWASTAPQASPLTSNSLGSGLSVFSMPFLVPSISASPQTSPLTSNSSGSGLSFFSTPYSVPSSSVAPQTSNSSGSGFSFFSMPCSVPSSTAASQTYPLTSNSSGSGLSFFSTPHSVPSSSVAPQTSPLTSNSSGIDLSDFSMPYSVPFSSAVPQTYPLTSKSSGSGLSGFGMPSSVPSSSVPALYMTPTTSAQEFPLSGSSSGTSCPERVLEVVHQASMESSIPSARTQTSLVYSISGTLEAPTATQTSYRRGRFTVCDVIRTPNATSQVSLLNSSSNSLFGSTPSQFVGTDPSRGTTSGGSTSSSPSFSPEIMTPSATSQASLLNSSSSSLFGSTPSQLGGTAPSRSTTSGASTSASPSFSPGPATGTGTASTSPLKRPRSRTNLSEGDSSGQSE	624

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju12g0140	624	MobiDBLite	consensus disorder prediction	509	624	-	-
	Alju12g0140	624	PANTHER	NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1	2	341	IPR024882	GO:0005643\|GO:0006913\|GO:0008139\|GO:0017056
	Alju12g0140	624	MobiDBLite	consensus disorder prediction	183	215	-	-
	Alju12g0140	624	MobiDBLite	consensus disorder prediction	183	204	-	-
	Alju12g0140	624	Gene3D	-	90	181	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju12g0140	Alju-ChrAlju12	1735581	1739962	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju12g0140	2	293	NAC Transcription Factor Family	AT4G37130	40.719	5.85e-65	220