Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0138 ATGCCGTCAAACTCCGGCGACAATCCCCGACCATCCAAGTCTCCAGCTCCGCCGCCGGAACAAGAGCACCTCCCATGTCCTCGCTGTGACTCCACCAATACCAAGTTCTGTTACTACAATAACTATAACTTCTCTCAGCCCCGCCACTTCTGCAAGTCTTGCCGGCGCTACTGGACCCACGGCGGCACCCTCCGTGACATCCCCGTCGGCGGTGGCAGTCGCAAGAATGCGAAACGCTCTCGCACTGCCTCTACGGTTTCTTCCTCTGTTACGGCGACTTCCTCTGTTTCTACTCAGGACCATCTTCCTCTTGCTACTACCCCTGTTTTTGTATCCATCTCCGCCGGCCAAGGTGGCTCCTTGCCGTTCGCCGGTAACGGCGGAGTTGAGAGTGACTTGAAATCTAGTGTGGGAATGTGTGGAAGCTTCACTTCTTTGCTTAACAACACCAACCAAGGACCCGGGTTTCTGGCTCTAGGCGGGTTCGGGCTCGGACTCGGTCACGGGTTTGAAGATATGGGTTTTGGGAATGGAAGAGGTGGTGGCTGGAATTTTCCTGGGATGGTGGATGGCTCCGCCAACATCAACGGCGGAGTTGGGGCTGCTTCCGGCGTCGGGAATTCATGGCAGCTAGAAGGCGGCGAAGGTGGTGGTTTTGTTGGTGGTGGTGCAGATTGCTTCTCTTGGCCAGGACTTGCAATTTCAACACCTGGAAGTGGTCTGAAATAA 729 0.5556 MPSNSGDNPRPSKSPAPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTASTVSSSVTATSSVSTQDHLPLATTPVFVSISAGQGGSLPFAGNGGVESDLKSSVGMCGSFTSLLNNTNQGPGFLALGGFGLGLGHGFEDMGFGNGRGGGWNFPGMVDGSANINGGVGAASGVGNSWQLEGGEGGGFVGGGADCFSWPGLAISTPGSGLK 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0138 242 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Alju12g0138 242 MobiDBLite consensus disorder prediction 77 92 - -
Alju12g0138 242 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 150 IPR045174 GO:0003700|GO:0006355
Alju12g0138 242 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Alju12g0138 242 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Alju12g0138 242 MobiDBLite consensus disorder prediction 1 25 - -
Alju12g0138 242 MobiDBLite consensus disorder prediction 65 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0138 Alju-ChrAlju12 1730092 1730820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0138 20 242 C2C2-Dof Transcription Factor Family AT3G50410 52.321 1.48e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju12g0138 zf-Dof 3.3e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0138 12 1730092 1730820 Alju12g0138 12 1730092 1730820 ECH