Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0129 ATGTCCTATTACCGGAGGAACTTCGTTATTGTGCTCACGATCTTCATCGTCTACTCAACAAGAGCAGAAACGTCGAGCGACTGTGGAAACTTTTCCGTGACGTATCCTTTTGGATTCTCTGTAAAGAGTCCAATCAAATTAAGTTGCCGCGACAGCCGCTTGGAAATTGGGGGATTCCAGGTGAAGGAAGTAACCAATAAAAGTATCTTCGTCAACCTTCCTGCAAAGTGCAACCGAAGTATGGAATCTATCCGATCCCTTTTCAGTAAAAATTTCGCTCCCACACAGAACAATAGCTTTCTGGTGCAAAGTTGTTCGTCTCAGCCGAGAAGCTGTTTTATACCCGTACCCACCGCCAGTCTGATGGGCAGTCAATCCAATTTGGAGGATTGCCAAAGTGTTAACAGTGGTTGCTTTTTGCAAACAAAGAATGATACAGATGTTCTAACACGAGCGGACTTAAATCAAACTACGTGCAAGTTCTTGTTCTCTGCGGTTGCTATTGAGCACGGCAAAGACCCGACGGTTTCGCTCCGTCCTCAGGTGCTGGAATTGGGGTGGTGGCTTGAAGGTCGACCCCGATGCTCTGACAAAGCAATCCCTACCACAGTCCGTCTCGGCGGCGTGAAGACCGGGCACCGATGCCAATGTCATGAAGGTTACATCGGAGATGGCTTCGAGGAGGGCGCTGGTTGCCGGGAAGTTATTTCAGTTTCTCAGTGTAGAGCCGCAACACTATTATCTGGTGGATGTGGAAAAGCAATTAAAATCGGCGTTCTTGTTGGAGGTATCGTTGTTGTAGCTTTCATCCTGACTGGTGTGTGTCTTGGGTGTTACTTTGCTCGGCGCCGTTATACTTGTTTGAGAAAACAAATGACAGTAAAGCGCCTATTACGTGAAGCTGCAGGCAACTCTATTGTTCCTTTTTACCCGTACAAAGAAATAGAAAGGGCCACTAATTTTTTCTCTGAGGAGCAGAAGTTGGGAACTGGGGCGTTTGGTACGGTATATGCAGGAAGACTACACGATAATGAATGTGTTGCAATAAAAAAGATCAAGTACAGAGACACCAACAGTGTTGACCGAATTATGAACGAGATCAAACTTCTTTCTTCTGTGAGTCACCCTAATTTGGTACGCCTCTTGGGCTGCTGTATAGAGGGTGGTGAGCAGATACTTGTTTATGAGTTTATGCCCAATGGAACACTATCTCAGCATTTACGAAGAGTGGGGAAAACTGGACTTCCATGGACAATACGACTCACCATTGCTGCTGAAACTGCTAATGCAATAGCATATCTTCATTCTGCCATTGATCCCCCAATTTATCATAGGGACATAAAATCCAGTAATATACTCTTAGATTACAACTTCAAGTCGAAAGTAGCAGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCACATATCTCAACTGCTCCACAAGGGACTCCAGGCTACGTCGACCCTGAATACCACCAAAACTTCCATCTTTCTGATAAAAGTGACGTCTATAGTTTTGGGGTGGTTTTGGTTGAGATAATAACAGCCCTGAAAGTGGTTGATTTTGCACGATCTCACAGCGAGATTAATTTGGCTGCACTTGCTGTAGATAGGATCAGAAGAGGTTCTGTAGATGAGATCATAGATCCTTTTCTGGAGCCTCATAGGGATGCTTGGACACTCTACTCTGTTTACAAGGTGGCTGAACTTGCATTTAGATGCCTTGCTTATCATAGTGACATGAGGCCTACTATGTTGGAAGTAGCAGAGGAGCTAGAACAAATCAGACGCAGTGCATGGGCAACAATGGAAGAAACTTTATGCACCGCATCATCGGTTGGTTCCTCATGTTCATCGCCTCGCATTGGAAGTGAGAAGTCGATGGATCGTATTATTGCTCTTAAAAAAGCAGAACGAGGGAGCAAGAGATCAATGAGTCAAAAGAGGATGGATAAAATACAGCAATCTGTGGAAGAAGTGAGGGATAGCTCTCCTGTATCAATGCATGATCCTTGGTTAAGTGAACAAAGCTCACCCTCAGCAAACAGCCTGTTGGGAAATGTTGTTCAGTGA 2079 0.4483 MSYYRRNFVIVLTIFIVYSTRAETSSDCGNFSVTYPFGFSVKSPIKLSCRDSRLEIGGFQVKEVTNKSIFVNLPAKCNRSMESIRSLFSKNFAPTQNNSFLVQSCSSQPRSCFIPVPTASLMGSQSNLEDCQSVNSGCFLQTKNDTDVLTRADLNQTTCKFLFSAVAIEHGKDPTVSLRPQVLELGWWLEGRPRCSDKAIPTTVRLGGVKTGHRCQCHEGYIGDGFEEGAGCREVISVSQCRAATLLSGGCGKAIKIGVLVGGIVVVAFILTGVCLGCYFARRRYTCLRKQMTVKRLLREAAGNSIVPFYPYKEIERATNFFSEEQKLGTGAFGTVYAGRLHDNECVAIKKIKYRDTNSVDRIMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLRRVGKTGLPWTIRLTIAAETANAIAYLHSAIDPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPEYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARSHSEINLAALAVDRIRRGSVDEIIDPFLEPHRDAWTLYSVYKVAELAFRCLAYHSDMRPTMLEVAEELEQIRRSAWATMEETLCTASSVGSSCSSPRIGSEKSMDRIIALKKAERGSKRSMSQKRMDKIQQSVEEVRDSSPVSMHDPWLSEQSSPSANSLLGNVVQ 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0129 692 FunFam Wall-associated receptor kinase-like 14 289 397 - -
Alju12g0129 692 Pfam Protein tyrosine and serine/threonine kinase 325 594 IPR001245 GO:0004672|GO:0006468
Alju12g0129 692 SMART serkin_6 322 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0129 692 CDD STKc_IRAK 328 597 - -
Alju12g0129 692 ProSiteProfiles Protein kinase domain profile. 322 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0129 692 MobiDBLite consensus disorder prediction 641 660 - -
Alju12g0129 692 FunFam Wall-associated receptor kinase-like 20 398 607 - -
Alju12g0129 692 MobiDBLite consensus disorder prediction 671 692 - -
Alju12g0129 692 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Alju12g0129 692 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 675 IPR044652 GO:0004672
Alju12g0129 692 SUPERFAMILY Protein kinase-like (PK-like) 304 595 IPR011009 -
Alju12g0129 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Alju12g0129 692 Gene3D Transferase(Phosphotransferase) domain 1 398 617 - -
Alju12g0129 692 Gene3D Phosphorylase Kinase; domain 1 285 397 - -
Alju12g0129 692 MobiDBLite consensus disorder prediction 641 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0129 Alju-ChrAlju12 1607987 1611585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0129 1 690 Receptor kinase-like Gene Family AT2G23450 51.622 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Alju12g0129 PK_Tyr_Ser-Thr 6.3e-46 CL0016