Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0128 ATGGAAATCGGTGGATTACGAGTCAATAAAGTAACCTCTGGCAGTATCTTCATCAATGTTCCTTGGAAATGCAACCGAAGTATGCAATCAATCCGACCCCTTTTCAGCAACAACTTCGCTCCTACACGGAACAACAGCTTTATCTTGCAAGCTTGTTCGTCTACTCTTGGCGGCCGTGGTGTGCCCACTACCAGTCTAGTTGGTAATCAAATTGAATTGGAGGATTGTAATAAAGAAGGTGATAATATCAGCTTCTTCGCGGTCGTTCATAGAAAGAATAATGAATCGGATGTTGTGAGCTATGAGGATGTGAGTCGAAATCAGTGCAAGTTCTGGTTCTCGGCGATTGCTTTTGACCCGGCGGTTTCGGGGCAGTTTCAGATGCTTGAATTAGGGTGGTGGCTTCAATACCCCTGCCCATGCCACCGTGATGCAAAGTGTAACAAGGTCCATCTCGCCGACGGCAAGCTCGGCTTCCGGTGCCACTGCCCTGAAAATTACGTTGGAGATGGCTACCAAAACGGCACCGGTTGTCTCGTATGTACTCCAGATGCCTACTATTGCGAGCACATTACATCCAAACTTGGGAAAGTTGGTGGAGGGATTTCGGTTGCAGTTTTTCTGGGACTTCTTGCGTGTTTTCTATATGATGTCACCCTGCGGCATTCGAGAAAGAGAGAGAGAAAGAGAGCAGAGCAGCTGTTACGTGAAATTTTAGGTAATTCTAGTCTTGTAGTCTACCCGTACAACGAAATCGAAGCAGCCACTAATTTTTTCTGTGACCAACGGAAGCTGGGATCTGGGGCTTTTGGCACGGTTTATTTGGGGAAACTTCACAATAAATGGGTTGCAATAAAAAAGATAAAGAGTCGAGATAATAATAACGTTGTCCATGTCATAAATGAGATCAAGCTCCTTTCTCTTGTGAGTCACCCAAATTTAGTCCGTATCTTGGGTTGCTGGATACGAGGAAGTAAGCAAATACTCGTTTTTGAATTTGTGCCCAATGGAACACTAACTCAGCATTTACAAAGGCAAAGGGGTAATGTACTTGCATGGATAACAAGGCTCACCATTGCTTCTGAAACTGCCAATGCTATAGCATATCTACATTCTGCCATTGATCCTCCAATCTACCATAGAGACATAAAGTCCAGCAATATACTGCTGGATTACGACTTCAAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATAACAGACATATCACATATCTCAACTGCTCCTCGAGGGACACCAGGTTATCTTGACCCTTCATATGAGCACAATTTCCACCTCTCTGACAAGAGTGATGTCTATAGTTTTGGGGTGGTTTTAGTAGAGATAATAACTGCCCTGAAAGTGGTTGATTTTTCTCGACCTCAGAATGAGGTTAATTTGGCTGCACTTGCAGTTGATAGGATTGGAAGGGGTTGTGTGGAGGAGATAGTGGATCCTTTCCTGTCATCACATGAGGATGAATGGACCAACTATTCTGTTCACAAGGTGGCCGAACTCGCATTTAGATGCCTTGATTCACGAAGAGACATCAGGCCTGCTATGATGGAGGTGGCAGAGGAGTTAGAATACATCAAAAGCAGTGGATGCAATAAAATGGAGGAAACTATATGCACCACATCACCAGGGGCCTCTCATATTCATGAGAATTTAGGAACTCAGACGTTGACTGTTCCTGCAGATGGATAA 1713 0.4431 MEIGGLRVNKVTSGSIFINVPWKCNRSMQSIRPLFSNNFAPTRNNSFILQACSSTLGGRGVPTTSLVGNQIELEDCNKEGDNISFFAVVHRKNNESDVVSYEDVSRNQCKFWFSAIAFDPAVSGQFQMLELGWWLQYPCPCHRDAKCNKVHLADGKLGFRCHCPENYVGDGYQNGTGCLVCTPDAYYCEHITSKLGKVGGGISVAVFLGLLACFLYDVTLRHSRKRERKRAEQLLREILGNSSLVVYPYNEIEAATNFFCDQRKLGSGAFGTVYLGKLHNKWVAIKKIKSRDNNNVVHVINEIKLLSLVSHPNLVRILGCWIRGSKQILVFEFVPNGTLTQHLQRQRGNVLAWITRLTIASETANAIAYLHSAIDPPIYHRDIKSSNILLDYDFKSKVADFGLSRLGITDISHISTAPRGTPGYLDPSYEHNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPQNEVNLAALAVDRIGRGCVEEIVDPFLSSHEDEWTNYSVHKVAELAFRCLDSRRDIRPAMMEVAEELEYIKSSGCNKMEETICTTSPGASHIHENLGTQTLTVPADG 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0128 570 Gene3D Transferase(Phosphotransferase) domain 1 334 549 - -
Alju12g0128 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Alju12g0128 570 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 92 541 IPR044652 GO:0004672
Alju12g0128 570 Gene3D Phosphorylase Kinase; domain 1 197 333 - -
Alju12g0128 570 SUPERFAMILY Protein kinase-like (PK-like) 239 532 IPR011009 -
Alju12g0128 570 FunFam Wall-associated receptor kinase-like 20 334 543 - -
Alju12g0128 570 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Alju12g0128 570 SMART serkin_6 259 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0128 570 ProSiteProfiles Protein kinase domain profile. 259 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0128 570 Pfam Protein kinase domain 261 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0128 Alju-ChrAlju12 1602400 1606433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0128 3 537 Receptor kinase-like Gene Family AT2G23450 49.910 1.20e-178 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Alju12g0128 Pkinase 2.3e-42 CL0016