Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0119 ATGGGTTGGTTTACAAAGTTGATTAAGGGCTCCAACCATAAAATTTCAAGGGGACAGTATCAGGGGAAATATGGAAATGACAACATTTGGGATGACCATCGTAATTCAGTGGATGATTTGACTGATTTTGAGAAAGAAGAAATTGACCGTGCAATTGCACTCTCTCTATCAGAGGAGGATCAGAAAGGGAAAAAAGTTATTGAGTATGATTCACAGTCAGAAGATGAAGAACTTTGTCCTATTGATGAGGAGGAAGATGAACATCTCGGTAAAGTTCAAGAAGAGGAAGCTGATAGTCTTGCTGACATTCAAAAGGAGGAAGATGAACATCACGCAAAACTTCAACTCGAGGAAGATGAACAACTTGCGAGAGCAATCCAAGAAAGTTTAAGCATGGGTTCTCCTCCTCGACATGAAGTGGGTTCTATAGTTCAACCATTTTCTCTATTTTCCACTGGATACAGGATCTGTGCTGGCTGCAACGCTGAGATTGGCCATGGAAGGTTTTTAAGCTGTATGGGAGGAGTCTGGCATCCAGAATGTTTCCGTTGTCAAGCTTGCAATCTTCCAATCACTGATTATGAGTTTTCCATGTCTAGCAATCGCCCTTACCACAAATCCTGCTACAGGGAGCAGCATCACCCAAAATGTGATGTTTGCAAGAATTTTATTCCAACGAATTCAGCTGGCCTCATTGAATATAGAGCACATCCTTTCTGGCATCAAAAATACTGTCCATCACATGAGCGTGATGGCACTCCTCGCTGTTGTAGCTGTGAAAGAATGGAGTCAAGAGACGCAAAATATCTTTTACTGGATGATGGCCGGAAGCTATGTCTCGAGTGTCTAGACTCTGCAATAATGGATACTCATGAATGCCAGCCACTTTACCTTGAAATACAAGAATTTTATGAAGGTTTAAACATGAAAGTGGAGCAGCAAATTCCTATGCTTTTGGTTGAGAGACAAGCACTGAATGAAGCCATGGAGGGAGAAAAGAATGGTCATCACCACTTACCTGAAACTAGAGGACTTTGCTTGTCAGAAGAGCAGACTGTCACCACTATTTTAAGGAGACCAAGGATCGGAGCAGGCTACCGAACCATGGACATGATAACTGAACCTTATAGGCTGATCCGTCGCTGTGAAGTTACTGCCATTCTTGTTTTATATGGCCTTCCAAGGTTGTTAACAGGATCAATCCTGGCTCACGAGATGATGCATGCATGGCTCAGGCTTAAAGGTTACCCCAATCTAAGCCCCGAAGTTGAAGAAGGGATTTGCCAAGTTTTGGCTCATATGTGGTTAGATTCAGAAATATATTCTGGGTCTGGGAGCGATGGTGCATCATCCTCCTCGTCGTCTTCATCATCATCCTCGCCTTCCTCCTCTTCGTCCACGTCATCAAAGAAGGGCAAAAGGTCCGACTTTGAGAAGAAACTGGGTGATTTTTTTAAGCACCAGATTGAGTCTGATACCTCTTCAGCTTATGGAGATGGATTCAGATTGGGTAACAAGGCAGTGGGCAAGTATGGGCTCAGAAGGACCCTTGACCATATCCAACTGACAGGAAGTTTTCCCTTGTGA 1587 0.4342 MGWFTKLIKGSNHKISRGQYQGKYGNDNIWDDHRNSVDDLTDFEKEEIDRAIALSLSEEDQKGKKVIEYDSQSEDEELCPIDEEEDEHLGKVQEEEADSLADIQKEEDEHHAKLQLEEDEQLARAIQESLSMGSPPRHEVGSIVQPFSLFSTGYRICAGCNAEIGHGRFLSCMGGVWHPECFRCQACNLPITDYEFSMSSNRPYHKSCYREQHHPKCDVCKNFIPTNSAGLIEYRAHPFWHQKYCPSHERDGTPRCCSCERMESRDAKYLLLDDGRKLCLECLDSAIMDTHECQPLYLEIQEFYEGLNMKVEQQIPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTILRRPRIGAGYRTMDMITEPYRLIRRCEVTAILVLYGLPRLLTGSILAHEMMHAWLRLKGYPNLSPEVEEGICQVLAHMWLDSEIYSGSGSDGASSSSSSSSSSSPSSSSSTSSKKGKRSDFEKKLGDFFKHQIESDTSSAYGDGFRLGNKAVGKYGLRRTLDHIQLTGSFPL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0119 528 Pfam LIM domain 157 212 IPR001781 -
Alju12g0119 528 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 43 62 IPR003903 -
Alju12g0119 528 FunFam Protein DA1-related 1 151 210 - -
Alju12g0119 528 Pfam Protein DA1 306 522 IPR022087 -
Alju12g0119 528 MobiDBLite consensus disorder prediction 446 474 - -
Alju12g0119 528 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 183 238 - -
Alju12g0119 528 Coils Coil 100 120 - -
Alju12g0119 528 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 117 136 IPR003903 -
Alju12g0119 528 ProSiteProfiles LIM domain profile. 155 215 IPR001781 -
Alju12g0119 528 CDD LIM_DA1 157 209 - -
Alju12g0119 528 ProSitePatterns LIM zinc-binding domain signature. 157 191 IPR001781 -
Alju12g0119 528 Gene3D Cysteine Rich Protein 148 214 - -
Alju12g0119 528 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 150 182 - -
Alju12g0119 528 PANTHER PROTEIN DA1-RELATED 2 3 527 IPR045218 -
Alju12g0119 528 MobiDBLite consensus disorder prediction 446 470 - -
Alju12g0119 528 SMART lim_4 156 208 IPR001781 -
Alju12g0119 528 SMART uim 43 62 IPR003903 -
Alju12g0119 528 SMART uim 117 136 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0119 Alju-ChrAlju12 1447596 1452472 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju12g0119 DA1-like 8.4e-106 CL0126