Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0118 ATGCTTTACAGATGCTATACAGATGTTGACAATTTTAGGGGAGTTTACCCTTCTAGCCGAGAAAGCCTATTTGAAACTACTGGGAAAATGGACGTTTTATTCCGGAAGGGGGAAAAAAACTACCCGAATCGCGAGTGTGGGAGAGAAGTTAGATTCTGTTTCAAGGATTGCAGTGATATGGATGTAGCGGAATTAACCTCGGAACAGGTGTTGAGGAGGGATATCCCATGGGAGACCTACATGGCGACTAAGCTGATCTCGGGCACAAGCCTTCAGCTCTTGAGGCGTTATGATCATCGATCACAAAGTCAGAGAGAACAGTTGCTGGATGATGATGGTCCAGCTTATATTCGAGTATTCGTTCATGTTTTGCATGATATTTTTAAAGAGGATACCGTAGAATATGTTTTGGCGTTGGTGGATGAAATGCTTGCAGCAAACCCAAAAAGGGCTAGATTGTTTCATGATAAGTCCCTTGCTGATGTAGATACCTACGAACCTTTCTTAAGATTGCTCTGGAAAGGGAATTGGTTCATTCAAGAGAAAAGTTGTAAGATCCTCGCTTCAATAGTTAGTGTCCGGCCAAAAAATCAAAATGGCTTTGTTGCAAATGGAGAAGCATCAAACTCAAAGAAACCCCTTACTACAATTGATGATGTTTTGACAGCATTGGTGAAATGGCTTTGTGAGCAGCTGAAGAAGCCTTCTCATCCTAGTCGTGGTGTCCCAACTGCTGTCAATTGCTTGTCAACCTTACTCAAGGAACCCATGGTTAGGTCTCCCTTTGTTAAAGCAGATGGGGTCAAATTGCTTGTACCTTTGATTTCACCAGCATCCACTCAACAATCGATTCAGCTTCTTTATGAAACATGCCTCTGCATATGGCTTTTGTCCTATTATGAGCCCGCAATTGAATACTTGGCTACTTCAAGATCCCTTCCGCGACTTATTGATGTCATAAAGAGCTCTACAAAAGAAAAGGTTGTTAGAGTTGTTACCTTGACTTTTAAAAACTTGCTGTCAAGAGGAACATTGGGTGCTCAAATGGTTGACCTTCAGCTGCCACAAGTTGTTCAGAATTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTAAATTACCTGGAAGAAGGGCTTAGGGATAACATTAAGAAACTAAGTTCTTTTGATATGTACAAGCAAGAAGTTCTTTTGGGCAATCTGGACTGGTCTCCCATGCATAAAGATCCCATATTTTGGCGCGAAAATATTACCAACTTCGAAGAGAATGACTTCCAGATTGTAAGAGTCCTAATAACAATTTTGGACACGTCTGGGGATTCGAGGGCTCTAGCTGTTGCTTGCTTTGACCTTTCACAGTTCATAAATTACCATTCTGCTGGGAGGGTCATCGTGACGAACCTGAAAGCCAAAGAACGAGTAATGAAATTGATGAATCATGAGAACGCCGAGGTCACTAAAAATGCCTTGTTATGCATCCAGAGGCTTTTCTTAGGTGCCAAGTTTGCAAGCTTCCTGCAGGCTTAG 1536 0.4225 MLYRCYTDVDNFRGVYPSSRESLFETTGKMDVLFRKGEKNYPNRECGREVRFCFKDCSDMDVAELTSEQVLRRDIPWETYMATKLISGTSLQLLRRYDHRSQSQREQLLDDDGPAYIRVFVHVLHDIFKEDTVEYVLALVDEMLAANPKRARLFHDKSLADVDTYEPFLRLLWKGNWFIQEKSCKILASIVSVRPKNQNGFVANGEASNSKKPLTTIDDVLTALVKWLCEQLKKPSHPSRGVPTAVNCLSTLLKEPMVRSPFVKADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRSLPRLIDVIKSSTKEKVVRVVTLTFKNLLSRGTLGAQMVDLQLPQVVQNLKAQAWSDEDLLEALNYLEEGLRDNIKKLSSFDMYKQEVLLGNLDWSPMHKDPIFWRENITNFEENDFQIVRVLITILDTSGDSRALAVACFDLSQFINYHSAGRVIVTNLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKFASFLQA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0118 511 Gene3D - 403 503 IPR038497 -
Alju12g0118 511 Pfam V-ATPase subunit H 64 382 IPR004908 GO:0000221|GO:0046961|GO:1902600
Alju12g0118 511 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 60 510 IPR004908 GO:0000221|GO:0046961|GO:1902600
Alju12g0118 511 Pfam V-ATPase subunit H 388 500 IPR011987 GO:0000221|GO:1902600
Alju12g0118 511 Gene3D - 59 390 IPR011989 -
Alju12g0118 511 FunFam V-type proton ATPase subunit H 402 503 - -
Alju12g0118 511 SUPERFAMILY ARM repeat 67 501 IPR016024 -
Alju12g0118 511 PIRSF V-ATP_synth_H 54 509 IPR004908 GO:0000221|GO:0046961|GO:1902600
Alju12g0118 511 SMART arm_5 300 341 IPR000225 GO:0005515
Alju12g0118 511 SMART arm_5 255 299 IPR000225 GO:0005515
Alju12g0118 511 SMART arm_5 461 501 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0118 Alju-ChrAlju12 1437820 1447424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0118 60 511 Primary Pumps ATPases(2) AT3G42050 76.106 0.0 721