Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0117 ATGGCGAATCGCTTCTTCCTCTACTCTGCAAATCTTTTTCTTTCGGTAATTCTTATCTTTTCCACTTCACACAGTGCAGCTCAACAACAGAACAAAAACAAAGAAGCAAACTTTTCATGCCCTGTTGATTCATCTTCTTCCTGTGAAACATACGTCTCATACTTTGCTCAGTCTCCCAACTTTCTGAGCATAACCAACATATCTGATTTATTTGGGATCAGTCCTCTTTCAATAATAAGGGCAAGCAATATAATGTTTGAGGATAACTACAAGCTTATTCCTGGCCAGCTCTTACTTGTACCTGTGACTTGTGGCTGCACAGGAAGTCACTCATTTTCTAACATTTCCTATGTTATGAAGCAAGGTGATACCTACTACTTTGTTTCAACCTTTTCGTTTGAAAATCTCACCAATTGGCAAGTAGTGGAAGCTTCAAGTATTAATCTTGACCCAAATATCGTGCCGGTAGGGACCAGTGTGATTTTTCCTTTGTTCTGTAGTTGCCCTTCAAAGACTTGGTTGCAGAAGGGGATCAAGTTTCTAATCACCTATGTGTGGCAGCCCAATGACAATTTGTTCACTGTAAGTTCAAAGTTTAATGCTTCTTCAATGGACATTGTAACCGCAAATAACCATCTGAACTTCACAAATTTAGCCAGACTTCCAGTTTTGATCCCTGTTAGAAGCTTACCCGCACTTTCCCAACCTTACCCTTCATCATCTCTGAACAACCACAAAACAAAGCATCGTCCAATTTTCATTGGTACATTCGTGGGGCTTTCTGTTCTGATTGCTCTTTTGGTGATTATACTATATGCTTGCCATATGAGGAAGAAAAGGATGGGTTTGAGTAGGAAAACTGAAAGTTCGGAGACAGCAGATAAGATAATTTGTGGGGTTTCTTGCTATGTAAGTAAGCCGATCGTGTACGAAGCAGGTGTGATCATGGAAGCTACCAAGAAGCTTAATGAAAGGTACAAGATTGGGAAATCAGTGTACAAAGCCAGAATTGAAGGGCAGGTTGTGGCAGTTAAAAAAGTGAGGGACCAAAATGCGAAGGAGTTAATAATGATGCAGAAGATGAATCATACAAATCTGGTGAAACTAAAGGGTGTCTCTTCATCAGACAATAATGATGGAAATTACTTCCTAGTTTGCGAATATGCAGAAAATGGGTCTCTTGATAATTGGCTTTATCGCAGCAGGTATTCTTCAAGCTCTATGTCCTTTCTCACTTGGAACCAGAGGATAAGCATAGCACTAGATATCGCCATGGGTCTGCAATATCTGCACGATCACACACAACCAAGAATAGTCCATAGAAACATCACAGCAAGTAACATCCTTCTGGACTCCAAATTGAAGGCCAAGATAGCTAATTTCTCCATGGCAAGAACTTGCACCAATCTTGTGATGCTCAAAATAGACGTTTTTGCATTTGGGGTTGTTCTGTTGGAGTTGCTCACAGGGAAGAAAGGGATGGAAATGAATGAAAAAGGGGAGGTGATGATGTTGTGGAAGGAATTTGTGGGGATATTTGATTTTGAAGAGGGAAGAGAAGAGAGACTCAGAAAATGGATGGATCCTAAGCTTGGAAGCTTTTATCCTTTTGATGATGCTCTTGGATTGGCTTCTCTTGCTCTGACTTGCACAGTGGGTTGTGAGTCTATGTCAAGACCAACCATGGGAGAAATCGTTCTCAGCCTCTCTCTTCTCATTCAATCATCAGCTCATGCTTCATCCTTAAAGGGATCTTCCACATTAGATTTTGACGTCGCTTCACTAAACAGTCCTATCACAGCTCGTTGA 1809 0.408 MANRFFLYSANLFLSVILIFSTSHSAAQQQNKNKEANFSCPVDSSSSCETYVSYFAQSPNFLSITNISDLFGISPLSIIRASNIMFEDNYKLIPGQLLLVPVTCGCTGSHSFSNISYVMKQGDTYYFVSTFSFENLTNWQVVEASSINLDPNIVPVGTSVIFPLFCSCPSKTWLQKGIKFLITYVWQPNDNLFTVSSKFNASSMDIVTANNHLNFTNLARLPVLIPVRSLPALSQPYPSSSLNNHKTKHRPIFIGTFVGLSVLIALLVIILYACHMRKKRMGLSRKTESSETADKIICGVSCYVSKPIVYEAGVIMEATKKLNERYKIGKSVYKARIEGQVVAVKKVRDQNAKELIMMQKMNHTNLVKLKGVSSSDNNDGNYFLVCEYAENGSLDNWLYRSRYSSSSMSFLTWNQRISIALDIAMGLQYLHDHTQPRIVHRNITASNILLDSKLKAKIANFSMARTCTNLVMLKIDVFAFGVVLLELLTGKKGMEMNEKGEVMMLWKEFVGIFDFEEGREERLRKWMDPKLGSFYPFDDALGLASLALTCTVGCESMSRPTMGEIVLSLSLLIQSSAHASSLKGSSTLDFDVASLNSPITAR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0117 602 ProSiteProfiles Protein kinase domain profile. 290 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0117 602 SUPERFAMILY Protein kinase-like (PK-like) 313 569 IPR011009 -
Alju12g0117 602 Gene3D Phosphorylase Kinase; domain 1 318 389 - -
Alju12g0117 602 FunFam Os07g0541700 protein 389 472 - -
Alju12g0117 602 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 578 - -
Alju12g0117 602 Gene3D Transferase(Phosphotransferase) domain 1 470 588 - -
Alju12g0117 602 Gene3D Transferase(Phosphotransferase) domain 1 390 469 - -
Alju12g0117 602 Pfam Protein tyrosine and serine/threonine kinase 340 467 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0117 Alju-ChrAlju12 1432837 1434645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0117 39 578 Receptor kinase-like Gene Family AT3G21630 30.551 7.24e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Alju12g0117 PK_Tyr_Ser-Thr 2.2e-23 CL0016