Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0079 ATGTCTTCCTCATCCCCTGAAACTGCTCCATCTTCAGATTCTGGTAATAGTGCTGATACTAATAACAACAACAACGATGATAATAGTAGTAGTAATAATAATGATGGAGATTCATCTCAAAGCCCTCCATCACCCCCACCACCAGACCAGCAGGCCACGTCACCACCCCCACCACCGGGCCAGCAGGCCACGTCACCACCCCCACCACCGGACCGGCAGGCCACGTCACCACCAGACCAGCAGGCGGCATCACCCCCACCGACGCCATCATCTGACCAGAACTCTTCCAGTTCCAATAGTTCCGATTCTGGTTCTTCGTCGAATAACCAAGGCTCTTCTGGTAGCAAATCGCCATCTCCATCTTCAAGTCCTTCACCGGATCATAATAATAATAATGGTAATAAATCGTCGGGTTCTGGTTCATCATCATCCTCTGGATCGTCGTCATATTCAACACCTAATTTAACACCAAAATCTTCCGGCGGGAGCAACAAGCAGTCGCCTCCCGCTGCATTATCTGGATCCAGCGAAAATAGCAGCGGCGACAAGAATGACGATAGTAGGGCGGTTATTGGAGCCCTCGTTGGTGTAGGGTTTGTTCTTCTTATGATGTTCGCCGTCTGTATCTTTTGCTGCAGAAGGAAGAGGCAAAAGCATAGGTATTATTATAGCGACGATATCAAACCTAGCAAAACTGGAAGTAATTATTACAACAGAGGACACAACGCAAACAATTGGCGCCCTGGTGGGAATGACCATGTTGTGAGGATGCAGCAATCACCAGGCATGGGCATGGGCATGGGCCCGGATAGTGGTGGGTGGGGCCCAGTTCCACCACCTCCTCCGCCACACAGCACCGATATGAGCTCCAATTACTCATCACTGGGGCCGCCACCGCCGCCGTCCCCGCCGTTGTCTTTAGGGCTGAATTGTGGGACCTTCTCTTTTGAAGACTTGGCTGCTGCAACGGAGGGCTTTGCTGATAAGAATATGATTGGACAAGGAGGTTTTGGTTACGTGTATAAGGGTGTTTTGCCTAATGGAAAAGAAGTTGCAGTGAAGAGCCTGAAGGCTGGTAGTGGCCAAGGAGAGCGTGAGTTCCAAGCTGAGATCGAAATTATTAGTCGTGTTCATCATCGCCATCTCGTGTCGCTTCAGGGTTACTGTATTGCTGGTGGACAACGAATGTTGGTTTATGAATTTGTTCCCAACGATACTCTTGAGCATCACCTTCATGGAAAGGGTTTGCCTACCATGACTTGGCGTGACAGGATGAGAATTGCAGTAGGATCTGCCAAAGGGCTGGCCTACCTTCATGAAGACTGCCATCCTCGAATTATCCATCGCGATATCAAATCTGCCAATGTCCTCCTTGATGATAGCTTCGAAGCTAAGGTGGCTGATTTCGGATTGGCCAAGTTGACTAATGATAATAATACTCATGTCTCAACTCGGGTCATGGGAACATTCGGGTACTTAGCTCCAGAATATGCGTCAAGTGGAAAATTGACTGAGAAGTCAGACGTGTTCTCTTTTGGAGTGATGTTATTAGAAATTGTAACAGGGAAGCGACCTATAGATATCCAAAATATGATCGACGATAGCTTAGTAGACTGGGCTCGACCACTCCTGGCAAGAGGGCTGGAGGATGGCAACTTTGAAGAGCTGGTGGATCCGTTCTTGGAAGGCAATTACAATAACCAGGAATTGTCACGCATGGCTGCTTGTGCTTCTGCTAGCATTCGTCATTCTGGCAAGAAACGTCCTAAAATGAGCCAGATTGTAAGAGCACTGGAAGGAGATGTGTCACTGGACGACTTGAACGACACAAGGGTAGGGCATGGCCACCATGTGGCATCTACATCGAGTTCAGATTACGATACAACTGCGTATCAGGCTGACATGAAGAGGTTCAGGCAGATAGCTCTTGCTAGCCAAGAATTTGGAAGTAGTGAATCAAGTGGTGAGATGTCTCAGAATCCAAGGCAACACCTTTAG 1998 0.4845 MSSSSPETAPSSDSGNSADTNNNNNDDNSSSNNNDGDSSQSPPSPPPPDQQATSPPPPPGQQATSPPPPPDRQATSPPDQQAASPPPTPSSDQNSSSSNSSDSGSSSNNQGSSGSKSPSPSSSPSPDHNNNNGNKSSGSGSSSSSGSSSYSTPNLTPKSSGGSNKQSPPAALSGSSENSSGDKNDDSRAVIGALVGVGFVLLMMFAVCIFCCRRKRQKHRYYYSDDIKPSKTGSNYYNRGHNANNWRPGGNDHVVRMQQSPGMGMGMGPDSGGWGPVPPPPPPHSTDMSSNYSSLGPPPPPSPPLSLGLNCGTFSFEDLAAATEGFADKNMIGQGGFGYVYKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVSLQGYCIAGGQRMLVYEFVPNDTLEHHLHGKGLPTMTWRDRMRIAVGSAKGLAYLHEDCHPRIIHRDIKSANVLLDDSFEAKVADFGLAKLTNDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEIVTGKRPIDIQNMIDDSLVDWARPLLARGLEDGNFEELVDPFLEGNYNNQELSRMAACASASIRHSGKKRPKMSQIVRALEGDVSLDDLNDTRVGHGHHVASTSSSDYDTTAYQADMKRFRQIALASQEFGSSESSGEMSQNPRQHL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0079 665 FunFam Proline-rich receptor-like protein kinase PERK1 402 609 - -
Alju12g0079 665 SMART serkin_6 326 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0079 665 ProSiteProfiles Protein kinase domain profile. 326 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju12g0079 665 Gene3D Transferase(Phosphotransferase) domain 1 402 612 - -
Alju12g0079 665 MobiDBLite consensus disorder prediction 1 186 - -
Alju12g0079 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Alju12g0079 665 Gene3D Phosphorylase Kinase; domain 1 306 401 - -
Alju12g0079 665 SUPERFAMILY Protein kinase-like (PK-like) 300 598 IPR011009 -
Alju12g0079 665 MobiDBLite consensus disorder prediction 86 180 - -
Alju12g0079 665 MobiDBLite consensus disorder prediction 40 85 - -
Alju12g0079 665 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Alju12g0079 665 MobiDBLite consensus disorder prediction 1 39 - -
Alju12g0079 665 MobiDBLite consensus disorder prediction 646 665 - -
Alju12g0079 665 MobiDBLite consensus disorder prediction 260 306 - -
Alju12g0079 665 Pfam Protein tyrosine and serine/threonine kinase 330 596 IPR001245 GO:0004672|GO:0006468
Alju12g0079 665 FunFam proline-rich receptor-like protein kinase PERK1 304 401 - -
Alju12g0079 665 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 196 642 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0079 Alju-ChrAlju12 1003060 1007188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0079 198 658 Trihelix Transcription Factor Family AT1G70460 51.812 1.92e-154 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju12g0079 PK_Tyr_Ser-Thr 1.7e-47 CL0016