Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0053 ATGGCACATCACAGGCTGCATTCTGCTAGTCTTGGAGAAGAAATCAAATCTTCTTGCACAATTAAACATGGCACTGCTGACATAAGGCATTCAACTGCTTCAATAGGAAGAATCAACGAAATGGTCGCAGAGGCCAGACTTTCTAAAAGGAATCCCCTTGGCCATACTTCTTCCACAGACTCCATTAACTCTGCTTCTATTTTCTTTTCTTATGCAACTGGCAAGAGGATCCAAAGCACATCGTCTTCGTCATCATATAGATCTAGTATTGGAATAACTGCTCTTTCAAGCTCCCCTTCCACGAGCAGGAAGAGCGATTATGGAGGGGAGATAACAGATAAGAAGAAGAAGAAGAAGAAGAAAGCATTGTTTGCTTGTGTTGGAGTTGGGACAGAGTCATGCAAGAACTCAAGAAGATCACCGGAACATCGGAGAGTTGATGAAGCAGCAATTATCGAGAGAGCGCGCGTGGTGGAGAGTCTGCCACAGTTCTGGGCTGATAAGTACCAGCCTGCTTCATTGAACGCGTTCCTTTGCCACAAACAAGAAGCTCAACTTCTCAAGAAATTAGCGTGTCTGGATGAACTTCCACATACTTTGCTAAAAGGTCCCTCTGGTTCTGGGAAAAGAGCCTTAGCAATGGCTTTTCTGCGAGAAATATACGGCCAAGAGTGTGGAAACTTATCCCACAATATAAGATATTTCCCCTTTCAGGAAGGAAGTCCTACAAAAGCAAGTGTTCCAATAACGTTCAGCTGTCATCATGTGGAACTAAACGTGAAACTGGAACGGAATGCTAAGTATGCTTTGATGGGGTTAGTGAAGGAAATGAGCTGTATCTATGCAGTGACACCCCAAGATGCCAATCTTAATATCAAGTCAGACTGCCAAGCGATGGTTCTCTATGAGGTTGACAAGGCAGAACAGGATATCCAGCAGATAATCTCGTGGATTATAAACTGTCACTCCCAAATATGCAAACTAATACTCTGTTGCCAAGACGATGTTGACATTCTAGAATCTGTCAGGAACCTGTTCAAAGTGATTCAAGTTCATCCACCTACTACTCCTCAGATTATGGAGGTTCTGTTTGAGATAGCAAAGAAGGAGGATATTCATTTACCAAAGAATTTGGCTGCTATGATTGCTGCTAAATCTAATCGGAATCTCAGGCAAGCTATCATGGCTCTTGAGGCATGTAAAGCATTCAAATATCCATTTTTGGAAGAACAGCCAATTTCAATTGGATGGGAGGATGTTGTAATAGAAATTACTTCAGAGATCATTGCTGATCCATCAAATTCATGCCTAATCTCAGTAAGAGGAAAATTTCAGAAGCTTATGGAGGATTTTGTCCACCCAAAATTAATTCTCCGGAAACTAGTGGAAGAACTTCTGAAAAATATCGAAGCCGGCTTAAAAAGGGAACTCTACTATTGGCATGCCTATTATGACAAAAGACTCCCACCTGGAACTTCAGCTTTAACCAAGTTAGCTGAATTTGTGGCCAAGTTTATGAGCCTATACAGAAAGAGCTTTGTCAGCAGGCAATATGTGTGTGGAGAAACGCTGCGTTTTCTTCTGAGTACTCTCCCAGTCCTATTGCGACTTCTTCGATTCCCTGCCATTTTCTCTGTTGATGTTTTGTTGCTCAATGCTTTTGGTTCTCAACTGATGCTCACTTCCTCAAATCCCTAA 1698 0.4211 MAHHRLHSASLGEEIKSSCTIKHGTADIRHSTASIGRINEMVAEARLSKRNPLGHTSSTDSINSASIFFSYATGKRIQSTSSSSSYRSSIGITALSSSPSTSRKSDYGGEITDKKKKKKKKALFACVGVGTESCKNSRRSPEHRRVDEAAIIERARVVESLPQFWADKYQPASLNAFLCHKQEAQLLKKLACLDELPHTLLKGPSGSGKRALAMAFLREIYGQECGNLSHNIRYFPFQEGSPTKASVPITFSCHHVELNVKLERNAKYALMGLVKEMSCIYAVTPQDANLNIKSDCQAMVLYEVDKAEQDIQQIISWIINCHSQICKLILCCQDDVDILESVRNLFKVIQVHPPTTPQIMEVLFEIAKKEDIHLPKNLAAMIAAKSNRNLRQAIMALEACKAFKYPFLEEQPISIGWEDVVIEITSEIIADPSNSCLISVRGKFQKLMEDFVHPKLILRKLVEELLKNIEAGLKRELYYWHAYYDKRLPPGTSALTKLAEFVAKFMSLYRKSFVSRQYVCGETLRFLLSTLPVLLRLLRFPAIFSVDVLLLNAFGSQLMLTSSNP 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0053 565 Gene3D - 416 509 - -
Alju12g0053 565 Gene3D - 163 354 IPR027417 -
Alju12g0053 565 SUPERFAMILY post-AAA+ oligomerization domain-like 416 509 IPR008921 GO:0003677|GO:0006260
Alju12g0053 565 FunFam replication factor C subunit 3 355 413 - -
Alju12g0053 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 401 IPR027417 -
Alju12g0053 565 Gene3D - 357 407 - -
Alju12g0053 565 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 162 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0053 Alju-ChrAlju12 767515 771582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0053 164 515 Core DNA Replication Machinery Family AT5G27740 36.620 2.38e-71 231