Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0026 ATGGCGGGTTTCTTCTCACTAGGCGGAGGAGGAAGCAGTAGCAGCCAGCAACAAGAACAAGGGCATCATAACCCAACCACGGAATTCCCTCCACCTGATACCCTATACTGGTACAAGAACGAGGATGTGCCGTCCTACAGAGGATTCGAGCTGTGGAACCACCAACAACAGCAACAAGATGTTTACGGCGGGGCGAGCCGGAGCTACGACGATCCGTCGTCGTCGTCGAGGGGGTTAGAGCAGCAGGATTTTCCAGCAGTAGTAAGCTCGCCTGCGGATTTCCGATGCGTGCGGGTGAACTCCGTTGACGACACGGACGAGCAATATGCATACCAAACGGCAGTGAACATAGGAGGGCATGTGTTCAAAGGAATTCTGTACGACCAGGGTCCTGAATATAATTACACATCTGGAGATGTGAGCGCCCCCGCCGCTGGTGTAGCCGGAGTTCAACCCTTGAACCTCATCGCCGGTGCTTCCAGCGGTGCGTCTGTTTTACCGGCGAGCTCAATAAGTGGCGGTGCCACGGTTTCGCCGAGTGGGGCTTTCGGGGATCCTCCTTCATTGTATGCAAGTTCACTTAATCCCTTCATGACTGGAGGTAGTGGTACGCCATTCTTTCCTCACTCAAGATCTTCATAA 642 0.5389 MAGFFSLGGGGSSSSQQQEQGHHNPTTEFPPPDTLYWYKNEDVPSYRGFELWNHQQQQQDVYGGASRSYDDPSSSSRGLEQQDFPAVVSSPADFRCVRVNSVDDTDEQYAYQTAVNIGGHVFKGILYDQGPEYNYTSGDVSAPAAGVAGVQPLNLIAGASSGASVLPASSISGGATVSPSGAFGDPPSLYASSLNPFMTGGSGTPFFPHSRSS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0026 213 MobiDBLite consensus disorder prediction 57 83 - -
Alju12g0026 213 NCBIfam LRP1 C-terminal domain 84 131 IPR006511 -
Alju12g0026 213 Pfam Domain of unknown function (DUF702) 73 132 - -
Alju12g0026 213 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 67 195 IPR007818 GO:0003700|GO:0006355
Alju12g0026 213 MobiDBLite consensus disorder prediction 8 27 - -
Alju12g0026 213 MobiDBLite consensus disorder prediction 57 84 - -
Alju12g0026 213 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0026 Alju-ChrAlju12 448233 449481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0026 72 200 C2H2 Transcription Factor Family AT5G66350 52.308 1.47e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Alju12g0026 DUF702 2.1e-24 No_clan