Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0020 ATGGACTGCCAAGCTGCTTTCAAGACCAGTTGTCGCAATGACGTCTGCTTCAAATTCAGCCCCCACGCCTTCCTCGACGACTTCAAGGTGCAGAATCTCACCCCTTCCGACGACTTCTTTGTCGACGACCTTCTTGACTTCTCCCACCACAACGCCCTCTTCGAACAGCCTGACGAACCACAACCACAACCACCCCCGCATGACTCTGTTTCTGTCTCCCCTCGCCGGCACACCCAAACTCCTCTCAAAGACGAATTCGCCTCCCCCCAACTCATCCTTCCGGCCGATGATGAAGCACACTTGGAGTGGTTGTCTCATTTCGTCGAGGATTCCTTCTTGGAATGCTCTGCCGCGTACCCTGCCGGGACTTTACCGGACATTCCGAAGACCAAGACGGAGAAAGTACTTGAATCCGAAACCCCTGTCGTGGCCTCGCCCTGTTTCCGAACTCCGGTTCCTGCTAAAGCCAGAAGCAAACGAACACGGACTGGAGTTCGGACCCGCCTGCAGCCCGACATTCTCGAGCGAAATACACTCGAATCACCACCGGAAAGTGCTGGAGATGCGGCGGAAGAAGGAGATAAGCGAGTTGGGGTCGAGTTTGGAGCATCCGCATGTGGTCCCCAGTTTTGA 633 0.5545 MDCQAAFKTSCRNDVCFKFSPHAFLDDFKVQNLTPSDDFFVDDLLDFSHHNALFEQPDEPQPQPPPHDSVSVSPRRHTQTPLKDEFASPQLILPADDEAHLEWLSHFVEDSFLECSAAYPAGTLPDIPKTKTEKVLESETPVVASPCFRTPVPAKARSKRTRTGVRTRLQPDILERNTLESPPESAGDAAEEGDKRVGVEFGASACGPQF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0020 210 MobiDBLite consensus disorder prediction 54 85 - -
Alju12g0020 210 MobiDBLite consensus disorder prediction 169 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0020 Alju-ChrAlju12 380336 381394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0020 4 167 C2C2-Gata Transcription Factor Family AT5G66320 40.000 3.15e-20 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2354 09 46549287 46551094 Alju12g0020 12 380336 381394 CCT
Alju12g0020 12 380336 381394 Alju09g2354 09 46549287 46551094 ECH
Alju12g0020 12 380336 381394 Alju12g0020 12 380336 381394 ECH