Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0009 ATGGAGTCGATGGAGTCATGTGTCCCACCTGGGTTTCGTTTCCACCCAACCGATGAAGAGCTTGTTGGCTATTATCTGAAGAAGAAAGTTGCTTCTCAGAAGATTGACCTTGATGTCATCAGAGAGATCGATCTATATCGTATAGAACCGTGGGATCTTCAAGAGAGATGCAGGATCGGGTACGAGGAGCAGAATGAGTGGTATTTCTTCAGCCACAAGGACAAGAAGTATCCGACAGGGACGAGGACGAACAGAGCTACCATGGCGGGGTTCTGGAAGGCGACAGGAAGAGACAAGGCGGTGTACGACAAGACAAAGCTCATAGGTATGAGGAAGACCCTCGTTTTCTACAAAGGAAGAGCTCCGAATGGCCAGAAAACTGACTGGATCATGCACGAATATCGGCTCGAATCTGATGAGAATGGACCTTCACAGGAGGAAGGATGGGTTGTATGCAGAGCTTTCAAGAAAAAAACGAACGGCCAAACGAAGGCCGTGGATGGATGGGATTCAAGCTACTTGCTGGAGGAAGCAAGTGGAGTGGATCCTATTGACTTAATCGCAAGGCAGCCTCATCATCATCATCATCAGAGTTATAACGTAACACGAAACAATTACACGTGCAAGCAAGAGATAGAAGTGGACACCTTGATTCACTCATCAGACCCATTATTCATACAACAGCTTCCTCAGCTAGAAAGCCCGTCTCTTGTATTGACAAAGTGGCCTAGCTCATCAGACAACAAAAATAGCAACGAGGAATATGACCCAACCACAAAGAAAGTGACTACTGATTGGAAGGCTCTCGACAAGTTTGTGGCTTCCCAATTAAGCCAGGAAGACAGCTTTGAAACGCCCAAATATAACAGCTCTGACATTTCGTCCATGGTCTTGTTGCAGAATACTGCTACCAGAGATGAAGCAGATGAAGGCAACAGGTTAAGCTTAAGCTCTTTTTTTAACACTAGAACCTCATCAGACTCTGATATTGGGATATGCGTATTTGACAAATGA 1014 0.4556 MESMESCVPPGFRFHPTDEELVGYYLKKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPSQEEGWVVCRAFKKKTNGQTKAVDGWDSSYLLEEASGVDPIDLIARQPHHHHHQSYNVTRNNYTCKQEIEVDTLIHSSDPLFIQQLPQLESPSLVLTKWPSSSDNKNSNEEYDPTTKKVTTDWKALDKFVASQLSQEDSFETPKYNSSDISSMVLLQNTATRDEADEGNRLSLSSFFNTRTSSDSDIGICVFDK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0009 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 256 - -
Alju12g0009 337 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Alju12g0009 337 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Alju12g0009 337 MobiDBLite consensus disorder prediction 240 259 - -
Alju12g0009 337 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Alju12g0009 337 FunFam NAC domain-containing protein 17 161 - -
Alju12g0009 337 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0009 Alju-ChrAlju12 178951 181920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0009 1 336 NAC Transcription Factor Family AT2G18060 61.867 4.16e-144 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju12g0009 NAM 3.5e-38 No_clan