Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0008 ATGTCGAAGCACAATTGGACAGTGAAGCGGCGATGGCGAGCTGGAGTTGGGGAAGACGACGGCGTGAGGGCTGAGGGGAGTGAGAAAGGATAGTATGTTTATGAGATTGTCCCTAAATTGAATACGAGGGATGAGAATCAAGAAGCGGGTATGCCAACTCAACCCGTATCGCGATTGTTGCGTGATGCGTTGTCACTCCATCACGTCGTCGAGGAGCCGCAGCGGGCAAGGAAATCGTCGAACAGGGTTTCGTGGGCTTCTGCACCCAATCTCTGTCAGGTAAAATTGTTCGTATCTGAGGATTGCCCTTCAAGAGTTGGCCAGAAATCTCAAGATCATCTTGAAGCAAAGATGTCATCAATGTTGCATTCAAGTACTATTGAATTTAATGATTTACCCCCTGGGTTTGAATGCCATCCCCTTCCAAACCAATCAAAGCATGAAATCTCTTGCATTCCTCAGATTAGTTGGAGATGCCCTCCCCCGTTTGTTTTCAGTTATAATTGGCATGTCGTAGCTGGTGAAGAAAGTAGGGAAAAAGAAGATCAAAAACTTAGAGAGCTCAGAGTGCTTGAAGCAGTTTACCCTCGTCTCTCTGCAATTCCTCCAAGCCCTTCCGTTGCTTTGGATGTAGAAGAGGAAGATTATGATGATAACGTCACTCCTCTGGTCCCTATCGTTCCCATTGAGGAAGAGGAGTCAATGGATGATAAACCCGAATTGGCAGCAGCTAGGGAAGCTCCTGCCGCTGTGCAGTCACAAAACTTGCACCAACATATGTCAGCTTTCTCGGCACCAATTCAATGTCATACCTCTTCTTCTCTTGCCTTAACCGTGAGCGGAAATTCCTCACCTGGGATATCCCCTGGTTTGGAAGTAGATTTAGCAGCTGCTTCTGCTGTTGTGAGTGCCATTATGAAGAGTAGTGAGCAAGGAAGCTTGATTGATATGGATCTACTCGTTAAAATATTCAATGACCCATTAATGATTGAGAAATTAGTTAATGATCTTAGAACTGCTGCTGCTGCCACAACTGCAAGCGCATCCTCTAGTGCAGTGGCAATACCCACTTCTGGACCGAAGCTTGCAGCGCCTTCAGCTCCACCGTCGACACCCACACTTGGAGTTACACCCACAATCACTGTGGGTTTGTCATCTTCTTCAGGGTTGGAGCCTGAAATTCCGCCAATCTCATTATCAACACCAATGCCTGGCTCTGTTCCATTGCGGGCTCCTGCACCTGTGAACAAAAGTTGTCACCATATGTCAATTGGAGTTGTCCCAACTTTAGATACCCAGCCTCCTCAACGAGATGCTTTTCTGGCGACTGAGGCGATGCATGCAGCATCGCTGGCTTCCATTCCAACCATTTCTCCCAATGGGAACTTGCAACATTCAATGACAAGTCAGGTGCGATCATTTGCTGCCAAGGAAGCTCAATCTGTTAAGGATGCCAACTATTTAAAGAATCTGATTAGGCAACACGGTTCAGATAAGAAAGACACGCAGGACTCACAAATAGGTATCCGGCATAGTAACTTCCAAAATTTGAAATCGGTACATAACAATAAACCTGGAGAAGTTAAAAAAATCCAGAAGAAAACTTGCATATACTTTAACAGCTCAAGGGGGTGTCGCAATGGTTCCAGTTGCCCCTATCAGCATGATATCTCCCTTCCGTGGGGAGCTGGTAACGCTTTAGGGGGCCAGAATTCAAAAAGATTGAAACTAGAACCGAAATTAAGGGAAGAATATAAATCTTAA 1764 0.4586 MSKHNWTVKRRWRAGVGEDDGVRAEGSEKGXYVYEIVPKLNTRDENQEAGMPTQPVSRLLRDALSLHHVVEEPQRARKSSNRVSWASAPNLCQVKLFVSEDCPSRVGQKSQDHLEAKMSSMLHSSTIEFNDLPPGFECHPLPNQSKHEISCIPQISWRCPPPFVFSYNWHVVAGEESREKEDQKLRELRVLEAVYPRLSAIPPSPSVALDVEEEDYDDNVTPLVPIVPIEEEESMDDKPELAAAREAPAAVQSQNLHQHMSAFSAPIQCHTSSSLALTVSGNSSPGISPGLEVDLAAASAVVSAIMKSSEQGSLIDMDLLVKIFNDPLMIEKLVNDLRTAAAATTASASSSAVAIPTSGPKLAAPSAPPSTPTLGVTPTITVGLSSSSGLEPEIPPISLSTPMPGSVPLRAPAPVNKSCHHMSIGVVPTLDTQPPQRDAFLATEAMHAASLASIPTISPNGNLQHSMTSQVRSFAAKEAQSVKDANYLKNLIRQHGSDKKDTQDSQIGIRHSNFQNLKSVHNNKPGEVKKIQKKTCIYFNSSRGCRNGSSCPYQHDISLPWGAGNALGGQNSKRLKLEPKLREEYKS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0008 587 MobiDBLite consensus disorder prediction 357 414 - -
Alju12g0008 587 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 75 578 - -
Alju12g0008 587 ProSiteProfiles Zinc finger C3H1-type profile. 530 558 IPR000571 GO:0046872
Alju12g0008 587 MobiDBLite consensus disorder prediction 373 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0008 Alju-ChrAlju12 120799 126222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0008 154 225 Homeobox Transcription Factor Family AT4G02560 40.278 5.54e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju12g0008 None None None