Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2042 ATGGAACTAAATAAGCCGGAAATTTCATTTGCTGCCAACCTTAGAAGGGCACCAGGTGTGTTTACTCAATACATGCATGCAGAATCAGCCATTGGTGTTTTAAAAACAGGACAGGATGTGCATAATAACATCTCAATACGGCCAGGGAAAGAATTTTCTGCAGAGTTTGGTCCTGAAGGAATTGCTGGTAGAAGAGAATCCGCTGCACCTGGTTCACTCCGAAAGCATGAAAGTAGGTTTGGATTTCAGGGGCAGAAAGGCCAAGTGAGATATGAAGATTTTACTAATATTCTGGGATTGAGGAGAATGAACTCTGAGAACCCTTTTGACATTGCAGATCTTAACTTCACAAGAGAGCCAACTCAAGAGATAGAAAATGGGGCTTTTGTTGATAAAAATAGCAAAAATCGAAAGGAAGAATGTAATGTTACACTAGGAGTGATGAAGACTCTAGGCGAATCAGTTGGTGATCAAGCTGATACAGGTATACCTGGATCTCCTTTTCTCAGAAAGGAATCCTCCTATTCAAATGAAGTTTCTGGTTTAGGAGTTTCAGATGGTTCTCACTCTGGAAAAATTAAGTTACTTTGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGAGACGGGAAACTCAGATATGTGGGGGGAGAGACTCGCATTATATCTATCCGAGAGGACATTTCGTGGCAAGGGCTTGTCAAGAAGACCTCGGGTATTTGCAATCAACCTCACACAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTTTAATATCTGTCTCTTCTGATGAGGATCTTCAAAATATGATAGAAGAATACCATGGGCCTGAAAGGCATAAGGGATCTCAAAGACTTCGAATTTTCTTAATTCCCTTGAGTGAATCTGAAAAGGAATTGTCATTTGAAGCAAGAACTGATCAGCAGAGTAATCCTGATTATCAATATGTTGTTGCAGTGAATGGCATAGGGGACTGTAGTCCAAGAATAAATAGTTCAGGGCAGAGCCTGACAAATGAAGCTGGTCCATTAGGGACACATTTGAATTTTGCTCCAGACTTTCAGAAAAAATTTCCTAATGTACCTTCTTCAGAGATCAAGGGTGATGGCAGTGCTATACATCCAAACGGATTTTTTAATGATTCTCAGAATCTGCAGAGGACCTCCAATCAACATCAACAGATTTCTTCTCCTCCATTTCAAGGAGGAAATTCGAGCAAAGTTTATGCAGAGTCTCAAGGTGATAATAGCTCATACCAGGGAAGTGCTGCGAGTAGTTTATCCTTTATTACTGCCCACCTATCACCTAAGACATCCTATGTTAGTGCTGCTAATTGTAGATACTCCCAACAAATGGATGCGACTTTCCTAATTGACAATCACCCCTGCCACCAAGTGGATGTTGGTCTGCCAGAACAGAACCATTGGGAGCTATTCAGAAATAATCCTGGCAAGGAATTTATAACAGCTTCGTATGCTGATCAAATTGATGGTTGTAATGATGAAATGTTGAGTGAAAGGTCCATGCATCAATCAGGAAATCCTCTTTCCTGCCTGGGCGAGCCAATTTGCTCACAGTCTGGATCTAATTGTATTCCTGATTCTATAAAATGGATACCTCATGCATTTTCTGATTCAAAGTTGCATGAGAGTGGATTAAAGTCTGGTTACTGCTCTCAAGAAGGGATTGGTCAATTTTCCTCGTTGAACCTTTCAATGGCTCAGTTGTCTTCTGTGGTACCCTCAAATGTTCCGCAAAGGGACCTTATGGAAATCCAGCACGATCCCTTTCTCATTTATCCCCAAATACAAAGTAAGATACCAAATGTGGAGCCAGGTGAATTGCACAGAAGGCAGGATTTTCCATTTTCTTCCCCATCTGCAGTATGTTTAGGAGTGAACGATCCTATTCAGAAGGATAGCATTTTATACAGTAAGAGGAATCCTTCAGCTCAAACTGATTTAACTGCATCTAGCTTTATAGAGCGGCAGTGTGGGGACAATACTGTGAATATAGAAAACATGAAGAGAATTGAAAACAAAAATTCCCTTCAGAGTAAGGATAGCAATCTTTATGAGAGGGAATCACCTGCTATTGCTGTAGAGAATGTGAATGAATTGCATCTTCTGGACTCTTCTCCAGCGTCCAATTTAAATATCAAGGTTATTAAACATAGTCAGTTGGATCAATCTTCTGAGGGTATGATCTCTGCATCGTCTTGCATGAAAGGAATTTCCCAAAATAATCTGATTGAGAAGACCCCATTAGATTTTTTTCACATGAGCCACGGGACTGGTGATGGGAGAGAATGTGGTTTAACTGAAAGTTTGAATGGTGAGCTAGGATTTGATTTCTCTTGGACCAGAAAATCTGGGCTTAATGCATCATCTCTAAAATGTGAAGGAAACTCTTGTGGTAAAACTTCTCTAAGTGATTATTTGTTCGAGCTGTCCATGGAGCCAGTTTCTCATAAACAAGCACAAGTTCAACCTTTACAGAAGGATACAGATCTCTATGGAAATCCAACAGTAAGCTCAGCTGTTCTGTATTCTTCAGTACTTCATAATGATCCTGGTCCAAGTTCAAGTTTTCCTGTGAATGAACTACGGAACTCAAGCAAGAATGTTGTGTTTAAAAGAGTATCTTCTCCCATTGATCAGTATAGTTACTTCCAAACCCTAAACCTTGTAGCTACTTCTAGTCGAATGGTTGATCAGTATAGTTGTGGAACTCTTGCCTGTGAAACAAAAGTTGAAGATACAATGTTGGAGCAATCAAAAATTTTTGAAAAGTGTGGCAATTCAAATAAAGTTGAGCCACTTGTTACTATAGAAGATGTGACTGATGTTGTTCCTCCAAGCGTTGATACTTCATTGGTGCCCAACCCGCATATAGTGGTTGATACTGGAAGTGATGTATTATCCCCGTATGCAACAGAGTTGGAGAGTACTATTCCTGATTCTGAACCTGAGGATTTTAAAGATGATGAAGACAAGAATGAATCCCTTACTGATGCAATGATAGCGAAAATGGAAGCCAGCATCTACGGCTTGCAGATAATTCAAAATGCTGATCTTGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTATCATGGAAAATGGAGGGGAACGGATGTTGCTATAAAGAGAATTAAAAAGAGCTGCTTTTCAGGAAAATCTTCTGCGGAAGAACGGCTGACGAAAGACTTCTGGAGAGAGGCACAAATCCTCTCAAATCTTCACCACCCCAATGTGGTTGCTTTTTATGGGGTTGTACCTGATGGAGCTGGAGGAACCTTGGCCACTGTAACTGAGTATATGGTCAACGGTTCCCTTAGGCATGTCCTTGTCAAGAAGGATCGATTACTTGATGAACGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATACTTGCATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTTGTGAATTTGAGGGACCCACAACGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGGATTAAACGCAATACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAATGGCAGTAGCAACCGGGTTTCTGAGAAGGTTGACGTATTCTCATTTGGCATCTCTATGTGGGAGATATTGACTGGAGAGGAACCTTATGCAGATATGCATTGTGGTGCTATTATCGGGGGCATTGTAAAGAATACTCTTCGACCGCCAATTCCGCCACGTTGTGACCCTGAATGGAGGAAGCTCATGGAAGAATGTTGGTCACCTGACCCTGATAGCCGGCCATCTTTTACTGAGATAACTAGTCGTCTCCGATCAATGTCTATGGCTTTTCAAGCTAAGCCTCTCTATCAGGTGCAGCAGACAACACGCAGTGTTCATTGCTGA 3945 0.4109 MELNKPEISFAANLRRAPGVFTQYMHAESAIGVLKTGQDVHNNISIRPGKEFSAEFGPEGIAGRRESAAPGSLRKHESRFGFQGQKGQVRYEDFTNILGLRRMNSENPFDIADLNFTREPTQEIENGAFVDKNSKNRKEECNVTLGVMKTLGESVGDQADTGIPGSPFLRKESSYSNEVSGLGVSDGSHSGKIKLLCSFGGKVLPRPRDGKLRYVGGETRIISIREDISWQGLVKKTSGICNQPHTIKYQLPGEDLDSLISVSSDEDLQNMIEEYHGPERHKGSQRLRIFLIPLSESEKELSFEARTDQQSNPDYQYVVAVNGIGDCSPRINSSGQSLTNEAGPLGTHLNFAPDFQKKFPNVPSSEIKGDGSAIHPNGFFNDSQNLQRTSNQHQQISSPPFQGGNSSKVYAESQGDNSSYQGSAASSLSFITAHLSPKTSYVSAANCRYSQQMDATFLIDNHPCHQVDVGLPEQNHWELFRNNPGKEFITASYADQIDGCNDEMLSERSMHQSGNPLSCLGEPICSQSGSNCIPDSIKWIPHAFSDSKLHESGLKSGYCSQEGIGQFSSLNLSMAQLSSVVPSNVPQRDLMEIQHDPFLIYPQIQSKIPNVEPGELHRRQDFPFSSPSAVCLGVNDPIQKDSILYSKRNPSAQTDLTASSFIERQCGDNTVNIENMKRIENKNSLQSKDSNLYERESPAIAVENVNELHLLDSSPASNLNIKVIKHSQLDQSSEGMISASSCMKGISQNNLIEKTPLDFFHMSHGTGDGRECGLTESLNGELGFDFSWTRKSGLNASSLKCEGNSCGKTSLSDYLFELSMEPVSHKQAQVQPLQKDTDLYGNPTVSSAVLYSSVLHNDPGPSSSFPVNELRNSSKNVVFKRVSSPIDQYSYFQTLNLVATSSRMVDQYSCGTLACETKVEDTMLEQSKIFEKCGNSNKVEPLVTIEDVTDVVPPSVDTSLVPNPHIVVDTGSDVLSPYATELESTIPDSEPEDFKDDEDKNESLTDAMIAKMEASIYGLQIIQNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKKSCFSGKSSAEERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDERKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPRCDPEWRKLMEECWSPDPDSRPSFTEITSRLRSMSMAFQAKPLYQVQQTTRSVHC 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2042 1314 CDD STKc_MAP3K-like 1033 1290 - -
Alju11g2042 1314 SUPERFAMILY Protein kinase-like (PK-like) 1016 1289 IPR011009 -
Alju11g2042 1314 Pfam Protein tyrosine and serine/threonine kinase 1028 1290 IPR001245 GO:0004672|GO:0006468
Alju11g2042 1314 Gene3D Transferase(Phosphotransferase) domain 1 1115 1313 - -
Alju11g2042 1314 SUPERFAMILY CAD & PB1 domains 209 294 - -
Alju11g2042 1314 PANTHER SERINE-THREONINE PROTEIN KINASE 259 1293 - -
Alju11g2042 1314 Gene3D - 211 293 - -
Alju11g2042 1314 ProSitePatterns Protein kinases ATP-binding region signature. 1033 1058 IPR017441 GO:0005524
Alju11g2042 1314 MobiDBLite consensus disorder prediction 360 422 - -
Alju11g2042 1314 SMART serkin_6 1027 1296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g2042 1314 Pfam PB1 domain 208 291 IPR000270 GO:0005515
Alju11g2042 1314 MobiDBLite consensus disorder prediction 55 81 - -
Alju11g2042 1314 ProSiteProfiles Protein kinase domain profile. 1027 1297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g2042 1314 Gene3D Phosphorylase Kinase; domain 1 1020 1114 - -
Alju11g2042 1314 PRINTS Tyrosine kinase catalytic domain signature 1217 1239 IPR001245 GO:0004672|GO:0006468
Alju11g2042 1314 PRINTS Tyrosine kinase catalytic domain signature 1261 1283 IPR001245 GO:0004672|GO:0006468
Alju11g2042 1314 PRINTS Tyrosine kinase catalytic domain signature 1109 1122 IPR001245 GO:0004672|GO:0006468
Alju11g2042 1314 PRINTS Tyrosine kinase catalytic domain signature 1146 1164 IPR001245 GO:0004672|GO:0006468
Alju11g2042 1314 SMART PB1_new 207 294 IPR000270 GO:0005515
Alju11g2042 1314 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1115 1307 - -
Alju11g2042 1314 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1020 1114 - -
Alju11g2042 1314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1152 1164 IPR008271 GO:0004672|GO:0006468
Alju11g2042 1314 CDD PB1_UP2 196 292 - -
Alju11g2042 1314 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Alju11g2042 1314 MobiDBLite consensus disorder prediction 377 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2042 Alju-ChrAlju11 41856871 41863326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2042 190 338 MAP Kinase Kinase Kinase AT1G16270 56.376 3.72e-40 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Alju11g2042 PK_Tyr_Ser-Thr 2e-63 CL0016