Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2038 ATGGCCTTCATGAAGCTTCTCTCTCTCTCTGCTCTCATCTTCTTCTGCTTCACTATCTCTCTCTCTTCTTCTGCCTCCTCTGACGTTGAACTTCTCTTGGGGCAAATCAAAGCATCCTTACAGGGTAACCCTCAAGATATCATTTTGTCTTCTTGGAACTCCTCTGTTCCTCTCTGCCAATGGATGGGTCTCAAGTGGGTCTTCTCCAATGCCTCTTCTCTCTCTTGCACCCACTCTTCCCCTCATTGGTTCGACCTTTCACTCTTCAGACACCCTCGTCTTCATTTGTTCTCTCTTCAGCTTCCTTCTGCTAATCTCTCTGGTTCCATCCCCCGACAGCTTTCTGAGTTCCCTATGCTTCAAAGTCTCTATCTCAACTTCAATTCATTGAATGGACCAATTCCTCTTGAACTTGGCTATAGTTTCTCCCTCTCCGACATCGATTTGCGTGAAAATCTTCTGAATGGAGCTTTGCCTCCATCCATCTGGAATATGTGCGACAGGCTTGTTTCTCTCAGACTCCATGGAAATTTGCTTTCTGGGTCTATTCCAGAACCAGCTTTGCCAAACTGTTCTTGTGAGAATTTGCGATTCCTTGATTTTGGCGAGAACAACTTCTCTGGGAATTTCCCAGGCTTCGTTACTCGTTTTGGTGGGTTGAAACAGCTTGACTTGGGTAATAATATGTTTGTGGGTCCTATTCCTCAGAGCTTAGAGGGGCTAAGGCTTGAAAAATTGAACCTTTCCGACAACAATTTTAGTGGTGTTTTGCCAACTTTTCCGGACCCCAAGTTTGGTCTGGAGGTTTTTGAAGGGAATAACCCAGACTTATGTGGGTCACCCTTGAGAAGTTGTAGTGGAAATTCTAAATCTAGACTAAGTGCTGGTGCTATCGCCGGTATAGTTATCAGTTTGATGGCAGGAAGTGTTATTTTAGCTTCATTGCTTATTGGCTATGTGCAGAACAAGATGAGGAAGGGCAGGGGAGGAAGTGATGATGAATTGGAGGAAGAAAATGACGAGGAAAATGGTGACAATAGTAATGATGTTGGTGGTGAGGGCAAGCTTATGTTATTTCAAGGTGGCGAGAATTTGACGTTAGACGATGTGCTGAATGCAAATGGGCAAGTTATGGAGAAGACATGTTATGGGACAGTGTATAAGGCAAAGCTTGCTGATGGAGGGACCATTGCATTGAGGTTGTTGAGAGAAGGTTTCTGCAGGGACAGGGCTTCAAGCTTGCCGGTTATAAAGCAACTGGGGAAAATTCGCCATGAGAATTTGATCCCTTTGAGAGCTTTCTATCAAGGAAAAAGAGGCGAGAAGCTCCTTATTTTTGATTATCTACCTCTTAGAACCCTGCATGATCTTCTACATGAGACCAAAGCAGGAAAACCAGTGCTGAACTGGGCTAGGCGACACAAGATTGCATTGGGGGTAGCTAGGGGGCTTGCATATCTTCACACAGGACTTGATTCTCCAATTACACATGGAAGTGTGAGATCAAAGAACATTGTTGTGGACGATTTTTTTGTTGCCAGGCTCACTGAGTTTGGGCTTGATAAGCTATTGGTTCCAGCAGTAGCAGATGAAATGGTGGCGATTGCTAAGTCTGAGGGCTATAAGGCTCCAGAGGTTCAAAGGATGAATAAATGTAATTCAAGAACCGATGTTTATGCATTTGGAATATTATTGTTGGAGATTTTGATAGGGAAGATACCTGGAAAAAGTGGGAGAGGAAATGAGTATGTGGATTTGCCTTCTATGGTGAAAGTGGCAGTTTTGGAGGAGACAACAATGGAGGTGTTTGATGTTGAGATTTTGAAAGGGATAAGAAGTCCTATGGAAGAAGGGTTGATTCAGGCTTTGAAGCTTGCAATGGGTTGTTGTGCCCCTGTGGCTTCAGTTAGACCCAGCATGGACGAAGTTCTGAGGCAATTGGAGGAGAACAGACCAAGAAACAGGTCTGCTTTATACAGCCCCTCAGAAGCTAGAAGTGGAAGTGGTACCCCATTTTGA 2019 0.4433 MAFMKLLSLSALIFFCFTISLSSSASSDVELLLGQIKASLQGNPQDIILSSWNSSVPLCQWMGLKWVFSNASSLSCTHSSPHWFDLSLFRHPRLHLFSLQLPSANLSGSIPRQLSEFPMLQSLYLNFNSLNGPIPLELGYSFSLSDIDLRENLLNGALPPSIWNMCDRLVSLRLHGNLLSGSIPEPALPNCSCENLRFLDFGENNFSGNFPGFVTRFGGLKQLDLGNNMFVGPIPQSLEGLRLEKLNLSDNNFSGVLPTFPDPKFGLEVFEGNNPDLCGSPLRSCSGNSKSRLSAGAIAGIVISLMAGSVILASLLIGYVQNKMRKGRGGSDDELEEENDEENGDNSNDVGGEGKLMLFQGGENLTLDDVLNANGQVMEKTCYGTVYKAKLADGGTIALRLLREGFCRDRASSLPVIKQLGKIRHENLIPLRAFYQGKRGEKLLIFDYLPLRTLHDLLHETKAGKPVLNWARRHKIALGVARGLAYLHTGLDSPITHGSVRSKNIVVDDFFVARLTEFGLDKLLVPAVADEMVAIAKSEGYKAPEVQRMNKCNSRTDVYAFGILLLEILIGKIPGKSGRGNEYVDLPSMVKVAVLEETTMEVFDVEILKGIRSPMEEGLIQALKLAMGCCAPVASVRPSMDEVLRQLEENRPRNRSALYSPSEARSGSGTPF 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2038 672 Gene3D Ribonuclease Inhibitor 167 286 IPR032675 -
Alju11g2038 672 FunFam Leucine-rich repeat receptor-like protein kinase 193 285 - -
Alju11g2038 672 Gene3D Ribonuclease Inhibitor 29 166 IPR032675 -
Alju11g2038 672 MobiDBLite consensus disorder prediction 651 672 - -
Alju11g2038 672 Gene3D Phosphorylase Kinase; domain 1 371 448 - -
Alju11g2038 672 Pfam Protein tyrosine and serine/threonine kinase 377 647 IPR001245 GO:0004672|GO:0006468
Alju11g2038 672 SUPERFAMILY L domain-like 54 268 - -
Alju11g2038 672 MobiDBLite consensus disorder prediction 326 353 - -
Alju11g2038 672 ProSiteProfiles Protein kinase domain profile. 372 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g2038 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 185 IPR046959 -
Alju11g2038 672 SUPERFAMILY Protein kinase-like (PK-like) 381 648 IPR011009 -
Alju11g2038 672 Gene3D Transferase(Phosphotransferase) domain 1 451 660 - -
Alju11g2038 672 MobiDBLite consensus disorder prediction 653 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2038 Alju-ChrAlju11 41806524 41809361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2038 1 672 Receptor kinase-like Gene Family AT3G24660 68.694 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju11g2038 PK_Tyr_Ser-Thr 3.4e-23 CL0016