Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2037 ATGCCAAGGCCGAGGCGATTCTTGAGCAACCACAACAATCTTCACTACCAAATGCCGAGTCAGCAATCTTTCTCGCTTCTTCATCATCCCTTCTTCAACCTTCTTTTCCTGCTCCTTCCTCTTCTTTCTTCTTCTTTTTCAAACAATAATGAAGCTCAAGTTCTACTTTCATGGCTCCACACTTCCTCCTCCTCTGTTCCTCCTTCGCCTTTCCCTGATTGGAACCCTTCAAACCCCAACCCTTGTAACTGGTCTTTCATCAAATGCTCTTCACGAAACTTTGTCACAGAGATAAACATTCAAGCAACTGAATTAGCGCTTCCTTTTCCTCCCAACATTTCAGCTTTTCCCTTTCTTCAAAAACTTGTCATTGCGGGGGCTAATCTTTCTGGGCTGATCTCACCTGATATTGGAAACTGCCCTCAGCTTATAACCATTGATCTTAGCTCAAATAATCTTGCTGGTACAATTCCTTATAGCATCGGCAAGCTGAAAAACCTCCAAAATTTGAGCTTGAACTCTAACCAGCTTTCTGGGGAAATCCCCAAAGAGCTTGGTGATTGTGTTAGTTTGAGGAACCTTGATATTTACGATAACAATCTTAGTGGAGTTCTTCCTCCTGAGTTGGGAAAGCTTTCAAATCTGGAGGTTATAAGAGCCGGAGGGAACAATGGCATTATGGGGAAGATTCCTGATGCTCTTGGCGATTGCAGGAATTTGACTATATTAGGACTGGCTGACACTACAATCTCTGGTTCATTACCTGCTTCTTTAGGTAACTTAAGGTTTCTTCGAACAATTTCTATTTATAATACTGTGTTGTCTGGTGAGATTCCTCCTGAGATAGGAAATTGCTCTGAGCTTGTGAACTTGTTTTTGTATGAGAATGAGCTGTTTGGTTCATTGCCAAAAGAGCTGGGTAAGCTTCATAAGCTTGAGAAAATGTTGCTGTGGCAGAATAAGTTTGCTGGAAGCATCCCTCAAGAAGTTGGTAACTGTGGAAACTTGAAGATTCTTGATGTTTCTTTAAACTCTTTGTCTGGAACCATACCTACTACTTTTGGAAACCTCACGAATCTTGAAGAGCTCATGTTAAGTAACAATAACTTATCTGGTTCAATCCCGCCGGTTCTTTCCAATCTGTCGGAACTCATACAGCTTCAGGTAGATACTAATCAAATATCAGGTTCAATTCCTGCTGAACTTGGAAAGTTGAAGAAGCTTACTGTCTTTTTTGCTTGGCAAAATAAACTTGAAGGAAGCATTCCTTCTGAATTGGGTGGATGTGCTAGCCTAGAAGCTCTTGATTTGTCATATAATTCACTCACTGATAGCTTACCTCCAAGCTTATTTCAGCTTCAAAATTTGACAAAGCTTCTGCTAATCTCTAACCATCTTTCTGGGCCTATACCCCGTGAAATTGGTAACTGCAGTTCTCTCATTCGGCTACGACTTTTGAACAACCAAATTGGTGGAGAGATTCCAAGAGAAGTTGGTTTTCTCAACAACTTAAGCTTTCTTGATCTGTCAGAGAATAATCTTACTGGTCTAGTGCCAGTTGAGCTAGGAAATTGCAAAGAACTGCAAATGCTGAACCTTAGCAATAACTCCCTTTCTGGTGTTTTACCTAGTTCTTTATCTTCCCTCACAAGGCTTGAGGTTTTAGATGTTTCTCTGAATCACTTTTCTGGTGAAGTTCCTCCAAGTATTGGACAACTCACTTCACTTAGCAGGCTTATCCTTAGCAGAAACTCATTCTCTGGATCAATACCCTCATCACTAGGCCTTTGTTCAAGTCTTCAACTACTAGATCTTAGTAGCAACAATCTCTCAGGGATCATCCCAGCAGAACTATTTGATATAGAAGCACTTGACATTGCTCTGAATTTGAGTCACAATGCATTCTCTGGAGTAATCCCACTACAGGTTTCTTCCCTAAATAAGCTTTCTGCTCTAGATCTTTCCCACAACAAGCTTGAAGGAGATCTGGTGGCACTTTCAGCACTTGAAAATCTTGTTTCTCTAAACATCTCCTTCAACATGTTCACCGGCTATCTCCCAGATATCAAGTTATTCCACCAACTGTCACCAACAGATTTGGAAGGAAATCAGGGCTTGTGTCCAAGTGGCAGAGATTCATGCTTCATTAGCAATTCTGCAATGACAAAAATGCAAAATAATAGTGATTCTAAGAGGGCTGAGAGAATCAAATTGGGCATAGGATTGCTAAGCGCCTTCACCGTTGCAATGGCAATCTTTGGGGTTCTTACAGTGCTGCGAGCAAAGAAAATGGCTCAGGATGACAATGATTCTGAGATGGGAGGGGACTCATGGCCTTGGCAGTTCACACCATTTCAAAAATTAAACTTCTGCATCAATCAAGTCCTAAAATGCTTGGTAGACTCTAATGTGATAGGAAAGGGATGTTCCGGGGTTGTTTATCGTGCAGAACTAGAAAATGGAGATGTCATCGCCGTGAAAAAACTATGGCCAACAGCAATGGCTTCTAAATACGATTGCCAAAATGACAAGCTAGCAGTTCAGGGAGCGGGAGTTCGTGATTCCTTCTCAGCTGAGGTTAAAACCCTGGGTTCCATTCGACACAAGAACATTGTGAGGTTCCTTGGATGCTGTTGGAATCGAAATACTAGGCTGCTTATGTATGACTACATGCCAAATGGCAGCCTAGGAAGCTTGCTGCATGAACGAAGTGGTGGAAACTGCTTGGAGTGGGACATCAGGTATCGGATATTGCTGGGAGCAGCTCAAGGCTTGGCCTATCTTCACCATGATTGTGTTCCTCCCATTGTTCACAGGGACATCAAGGCCAACAATATTCTCATAGGCCCTGATTTTGAGCCTTACATTGCTGATTTTGGGCTTGCCAAACTTGTTGATGATGGAGATTTTGCAAGATCCTCTAGCACACTGGCTGGTTCCTATGGCTACATTGCTCCTGAATATGGATACATGATGAAGATAACGGAGAAAAGTGATGTGTATAGCTATGGGATTGTAGTGTTGGAAGTGCTAACAGGGAAGCAACCAATTGACCCAACAATACCAGATGGGCTCCACATTGTTGACTGGGTAAGACAGAAAAGAGGAGGTGGAAGTGAGGTGCTGGACCCAAGCCTATGTGCAAGGCCTGAACCTGAAATAGAAGAAATATTGCAGACTTTGGGGGTGGCTTTGCTGTGTGTGAACCCTAGCCCAGAAGATAGGCCAACCATGAAGGATGTGGCTGCAATGCTTAAAGAGATCAGGCAAGAAAGGGAGGACTATATGAAAGTTGATGTGCTTCTTCACGGATCTTCTGCAAATGAAGAAGATAATAAAACTAATAATCATTCAAGTGAAGAGCCAAGAGGGAATATGATGAAGCATTCGTACCCAGTAAACAGAAACAACACTAGCTTCTCTACCTCTCTTCTTGTGTCTCCTTCATCCTCCAATACCTAA 3462 0.4232 MPRPRRFLSNHNNLHYQMPSQQSFSLLHHPFFNLLFLLLPLLSSSFSNNNEAQVLLSWLHTSSSSVPPSPFPDWNPSNPNPCNWSFIKCSSRNFVTEINIQATELALPFPPNISAFPFLQKLVIAGANLSGLISPDIGNCPQLITIDLSSNNLAGTIPYSIGKLKNLQNLSLNSNQLSGEIPKELGDCVSLRNLDIYDNNLSGVLPPELGKLSNLEVIRAGGNNGIMGKIPDALGDCRNLTILGLADTTISGSLPASLGNLRFLRTISIYNTVLSGEIPPEIGNCSELVNLFLYENELFGSLPKELGKLHKLEKMLLWQNKFAGSIPQEVGNCGNLKILDVSLNSLSGTIPTTFGNLTNLEELMLSNNNLSGSIPPVLSNLSELIQLQVDTNQISGSIPAELGKLKKLTVFFAWQNKLEGSIPSELGGCASLEALDLSYNSLTDSLPPSLFQLQNLTKLLLISNHLSGPIPREIGNCSSLIRLRLLNNQIGGEIPREVGFLNNLSFLDLSENNLTGLVPVELGNCKELQMLNLSNNSLSGVLPSSLSSLTRLEVLDVSLNHFSGEVPPSIGQLTSLSRLILSRNSFSGSIPSSLGLCSSLQLLDLSSNNLSGIIPAELFDIEALDIALNLSHNAFSGVIPLQVSSLNKLSALDLSHNKLEGDLVALSALENLVSLNISFNMFTGYLPDIKLFHQLSPTDLEGNQGLCPSGRDSCFISNSAMTKMQNNSDSKRAERIKLGIGLLSAFTVAMAIFGVLTVLRAKKMAQDDNDSEMGGDSWPWQFTPFQKLNFCINQVLKCLVDSNVIGKGCSGVVYRAELENGDVIAVKKLWPTAMASKYDCQNDKLAVQGAGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERSGGNCLEWDIRYRILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRQKRGGGSEVLDPSLCARPEPEIEEILQTLGVALLCVNPSPEDRPTMKDVAAMLKEIRQEREDYMKVDVLLHGSSANEEDNKTNNHSSEEPRGNMMKHSYPVNRNNTSFSTSLLVSPSSSNT 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2037 1153 MobiDBLite consensus disorder prediction 1130 1153 - -
Alju11g2037 1153 Gene3D Ribonuclease Inhibitor 47 206 IPR032675 -
Alju11g2037 1153 ProSiteProfiles Leucine-rich repeat profile. 648 670 IPR001611 GO:0005515
Alju11g2037 1153 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 320 1085 - -
Alju11g2037 1153 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 891 1103 - -
Alju11g2037 1153 Gene3D Ribonuclease Inhibitor 207 411 IPR032675 -
Alju11g2037 1153 Gene3D Ribonuclease Inhibitor 412 717 IPR032675 -
Alju11g2037 1153 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Alju11g2037 1153 Pfam Leucine rich repeat 335 394 IPR001611 GO:0005515
Alju11g2037 1153 Pfam Protein kinase domain 802 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g2037 1153 ProSitePatterns Protein kinases ATP-binding region signature. 805 828 IPR017441 GO:0005524
Alju11g2037 1153 SMART LRR_sd22_2 646 674 - -
Alju11g2037 1153 SMART LRR_sd22_2 164 185 - -
Alju11g2037 1153 SMART LRR_sd22_2 501 522 - -
Alju11g2037 1153 SMART LRR_sd22_2 357 383 - -
Alju11g2037 1153 SMART LRR_sd22_2 188 217 - -
Alju11g2037 1153 SMART serkin_6 799 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g2037 1153 Pfam Leucine Rich Repeat 431 450 IPR001611 GO:0005515
Alju11g2037 1153 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 782 890 - -
Alju11g2037 1153 SMART LRR_typ_2 549 572 IPR003591 -
Alju11g2037 1153 SMART LRR_typ_2 429 453 IPR003591 -
Alju11g2037 1153 SMART LRR_typ_2 501 524 IPR003591 -
Alju11g2037 1153 SMART LRR_typ_2 357 381 IPR003591 -
Alju11g2037 1153 SMART LRR_typ_2 309 333 IPR003591 -
Alju11g2037 1153 SMART LRR_typ_2 646 671 IPR003591 -
Alju11g2037 1153 SMART LRR_typ_2 573 597 IPR003591 -
Alju11g2037 1153 SMART LRR_typ_2 525 548 IPR003591 -
Alju11g2037 1153 SMART LRR_typ_2 164 188 IPR003591 -
Alju11g2037 1153 SMART LRR_typ_2 598 621 IPR003591 -
Alju11g2037 1153 Pfam Leucine rich repeat N-terminal domain 49 90 IPR013210 -
Alju11g2037 1153 ProSiteProfiles Leucine-rich repeat profile. 359 382 IPR001611 GO:0005515
Alju11g2037 1153 Gene3D Phosphorylase Kinase; domain 1 785 890 - -
Alju11g2037 1153 MobiDBLite consensus disorder prediction 1104 1153 - -
Alju11g2037 1153 PRINTS Leucine-rich repeat signature 646 659 - -
Alju11g2037 1153 PRINTS Leucine-rich repeat signature 504 517 - -
Alju11g2037 1153 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 431 718 - -
Alju11g2037 1153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 936 948 IPR008271 GO:0004672|GO:0006468
Alju11g2037 1153 FunFam Nuclear pore complex protein NUP107 48 205 - -
Alju11g2037 1153 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 305 413 - -
Alju11g2037 1153 FunFam Predicted protein 206 304 - -
Alju11g2037 1153 ProSiteProfiles Protein kinase domain profile. 799 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju11g2037 1153 SUPERFAMILY RNI-like 374 706 - -
Alju11g2037 1153 ProSiteProfiles Leucine-rich repeat profile. 431 453 IPR001611 GO:0005515
Alju11g2037 1153 SUPERFAMILY Protein kinase-like (PK-like) 787 1085 IPR011009 -
Alju11g2037 1153 SUPERFAMILY RNI-like 146 508 - -
Alju11g2037 1153 Gene3D Transferase(Phosphotransferase) domain 1 891 1107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2037 Alju-ChrAlju11 41798858 41802396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2037 46 1104 Receptor kinase-like Gene Family AT5G56040 47.903 0.0 948
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju11g2037 Pkinase 2.2e-38 CL0016