Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2036 ATGCTTTATGTTGCTTCTCTTGCTAGGATCTGCTGTTATTGCAAAAGCGGGCTCTTATCTTCTTTGCTTCCTCAATTGGTTACATGGGAGATCTGCATGCAAGGTGGTAACATAGAGATGGAGGAAGAAAATGGTTTAGATGTTAACGAAAGTGAGATGTGGCTTCAAGATGAACAAGAGGATCTTCTTGGTGTGAATGGTGCCTCTATGTTCTATGCTGATTTCCCTCTTCCAGATTTCCCTTGCATGTCATCCTCTTCCTCATCTTCCTCAACTCCACCACTTCAAGTCAACACCACCACATCTTCATCCTCCACCGCCACATCGTCCTCCTCCTCCGCCGAGAATAATCATAGGGTGGAGGAGCCGCCACTAGCAACCTTGGCCTCCACCGCTTCCACAGAGCTCCCTTTCCCGCCTGACAATTGTGCTGATGCCGAGGTGGCGGAGGAGCCATTTCCGTACGTGGACATGTTAGAGATCAACGATTTCTTCGACCCCACATTAGTTTTCCAAGATGAGGATTGCCCATTAGAGGAATATCCCCAGAATGAGATTGAGCGGCAGCAGCAGGAGCAACATGCAATTACACTGCGGCAGCAACCAGAGGATCAGGATCATCAACATGTGCTCTCTAATAATGATCATGATCACAACAGTGAACAAGAGATTCAAGGAAAAGGAGCAAACAACCCAGATGGGGAAATGAGCGATATGTTCTTGGAGTGGCTCAAAACAAACAAGGATAGCGTGTCAGCAAATGACTTGAGGAGCGTCAAGCTCAAAAAATCAACCATAGAGTGTGCTGCTAAGCGCTTAGGAGGAGGAAAAGAAGCCATGAAACAATTGTTGAAGCTTATTCTCCAATGGGTTCAAACTAGTCATCTTCAAAACAAAAGGCGCTCTGATAATATTATTATTAATGATGATGATGATGAGCCTCCAAATTTCGTCACAAACCCTAGCTCTAATTCCAACCCACATCTATTTGGAATACCTCAGTCATGTCCATGGGTTTCTCCTCCCCAGCCTTATCGGACAGATCCCGCGACTCTGGTACCTTCTTATCCATTGTTCGGGTATCCGGGTGACCCGTATTCAAATGGAGCTCCGAATAGCATCAATTCATATAACATGTTGGAAGCAGCTCATTCGTGGCCTCCATCTCTGTTCACCGTTGCTGCCCACTGCAACCAGTCATATGGGGACAGTAATGTTCACCAAGGTGTATTTGGCGGCTATGTGAATCAGTATTCTTCATATCATTATTTTCATGGCGTGGCGGCGGGGGATGACAAGTTAATAAGGTTAGGTCCCTCGGCGACCAAAGAAGCGAGGAAGAAGAGGATGGCGAGGCAGAGAAGGTATTTGACTCATCATAGGAGCCAGAAACACCATAGCCAACAACTACAGAATCATGATGATAATAATGACCAACTTGCAAGATTGGCAAGTGATTATAATTGCACCGGCGGCTCTGATGCGAATCCGGCCAATTGGGTGTACTGGGGGTCACTGGCCGGAGGAGCAGCTTCCGTGGTTCCAGCTGAACTAACCCGGCCGGCTTTGGATCGGACCGCCATGCAAACGCAGAATTATCAAACTAGAGTCCCGTCCACGGATCAAAGGCGTCAGGGATTGAAGACAGAGAAGAACTTGAAGTTTCTTCTTCAAAAAGTGTTGAAGCAAAGCGACGTTGGGAACTTGGGAAGAATTGTGTTGCCAAAGAAAGAGGCAGAAACCCACTTGCCTGAATTAGAGGCGAGAGATGGCATTTCTATAGCAATGGAAGACATTGGAACCTCTCGAGTTTGGAACATGCGCTATAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTGGAGAGTACTGGGGATTTCGTGAAGGCCAATGGACTACAAGAGGGGGACTTCATAGTGTTGTACTCAGATGTCAAGTGTGGCAAATTTCTGATAAGAGGAGTAAAAGTAAGGCAAGCAGATCAGATGAAGAAAGCCGGAAAAACGCAGAAAAACGTGGCTACGGCGGCAATTGCTAATAATGAGTCGAGCTCTCCAGCGTTGCCATTGAAGAAATTTAGAAGAGAAATAAACTGA 2100 0.4643 MLYVASLARICCYCKSGLLSSLLPQLVTWEICMQGGNIEMEEENGLDVNESEMWLQDEQEDLLGVNGASMFYADFPLPDFPCMSSSSSSSSTPPLQVNTTTSSSSTATSSSSSAENNHRVEEPPLATLASTASTELPFPPDNCADAEVAEEPFPYVDMLEINDFFDPTLVFQDEDCPLEEYPQNEIERQQQEQHAITLRQQPEDQDHQHVLSNNDHDHNSEQEIQGKGANNPDGEMSDMFLEWLKTNKDSVSANDLRSVKLKKSTIECAAKRLGGGKEAMKQLLKLILQWVQTSHLQNKRRSDNIIINDDDDEPPNFVTNPSSNSNPHLFGIPQSCPWVSPPQPYRTDPATLVPSYPLFGYPGDPYSNGAPNSINSYNMLEAAHSWPPSLFTVAAHCNQSYGDSNVHQGVFGGYVNQYSSYHYFHGVAAGDDKLIRLGPSATKEARKKRMARQRRYLTHHRSQKHHSQQLQNHDDNNDQLARLASDYNCTGGSDANPANWVYWGSLAGGAASVVPAELTRPALDRTAMQTQNYQTRVPSTDQRRQGLKTEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLESTGDFVKANGLQEGDFIVLYSDVKCGKFLIRGVKVRQADQMKKAGKTQKNVATAAIANNESSSPALPLKKFRREIN 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2036 699 MobiDBLite consensus disorder prediction 86 120 - -
Alju11g2036 699 MobiDBLite consensus disorder prediction 199 223 - -
Alju11g2036 699 MobiDBLite consensus disorder prediction 447 466 - -
Alju11g2036 699 FunFam B3 domain-containing transcription factor FUS3 553 668 - -
Alju11g2036 699 MobiDBLite consensus disorder prediction 442 472 - -
Alju11g2036 699 ProSiteProfiles B3 DNA-binding domain profile. 557 659 IPR003340 GO:0003677
Alju11g2036 699 Pfam B3 DNA binding domain 558 653 IPR003340 GO:0003677
Alju11g2036 699 MobiDBLite consensus disorder prediction 526 545 - -
Alju11g2036 699 SMART B3_2 557 657 IPR003340 GO:0003677
Alju11g2036 699 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 225 670 IPR044800 GO:0003700
Alju11g2036 699 MobiDBLite consensus disorder prediction 526 542 - -
Alju11g2036 699 MobiDBLite consensus disorder prediction 86 118 - -
Alju11g2036 699 CDD BfiI_C_EcoRII_N_B3 555 656 - -
Alju11g2036 699 SUPERFAMILY DNA-binding pseudobarrel domain 556 653 IPR015300 -
Alju11g2036 699 Gene3D - 553 673 IPR015300 -
Alju11g2036 699 MobiDBLite consensus disorder prediction 186 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2036 Alju-ChrAlju11 41787423 41790830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2036 44 686 B3 DNA Binding Superfamily AT3G24650 42.361 1.07e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju11g2036 B3 1.3e-17 CL0405