Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2033 ATGCTATGTCCAGAAGATAACATTGTTTTTCCTGCCAAACTTTTATTATCTGCAGCTGATGCATATAACCATACCGATTCTGAATTTCTCAAATTAGAAAACGCTCAAAACAGAGATGCTGGATCAACTGCTTCCACTACTATTCTAGTTGGTGATCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGTAGAGGTGGTAGTGCCATTTCTATCTCTCGAGATCATAAGCCAGACCAAACTGATGAGAGGCAGAGGATTGAAGATGTCGGGGGCTTCATCATGTGGGTTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGGGCATTTGGGGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCATGTATTTTTCTCATTGAAAATTGTAATAGCAGCTTTGCTGAAACAAAAAGGTATATGGATTTTGTTAGTCCAGGATCTCAAGCTAAGGAGGGATCCTTCTTTGGACTGGAAGCTATTTCTTGTTTTTACATATTTTCTCTATGGAAGTCCTTAA 546 0.4048 MLCPEDNIVFPAKLLLSAADAYNHTDSEFLKLENAQNRDAGSTASTTILVGDRLLVANVGDSRAVICRGGSAISISRDHKPDQTDERQRIEDVGGFIMWVGTWRVGGVLAVSRAFGDRLLKQYVVADPEIHVFFSLKIVIAALLKQKGIWILLVQDLKLRRDPSLDWKLFLVFTYFLYGSP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2033 181 SMART PP2C_4 5 154 IPR001932 -
Alju11g2033 181 Pfam Protein phosphatase 2C 22 132 IPR001932 -
Alju11g2033 181 CDD PP2Cc 20 133 IPR001932 -
Alju11g2033 181 Gene3D - 10 150 IPR036457 -
Alju11g2033 181 PANTHER PROTEIN PHOSPHATASE 19 132 IPR015655 GO:0004722|GO:0006470
Alju11g2033 181 SUPERFAMILY PP2C-like 17 133 IPR036457 -
Alju11g2033 181 ProSiteProfiles PPM-type phosphatase domain profile. 1 181 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2033 Alju-ChrAlju11 41762937 41764422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2033 10 175 PP2C-type Phosphatase Gene Family AT4G31750 65.517 2.10e-73 221