Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2023 ATGGGTAACGGTATTGGAAAAATCTGCCTATGCTCCTCCGGCGTCGGAGATATCTCCCGCCGGTACGAGATGCTTCCCTCCAATCCCTATGAAAAGTCTCTCGGCAATTCAATCAGCTACACTCGACCCGACCCATTTCGATTATCGTCCTGCTCCAATATTTCCTCCAACGAGGATTCCACCACGCAGATGACTTTCAGATCAATCTCCGGCGCTTCCGTGAGCGCCAACTCTTCCACCCCACCATCCATATATCTTGCCAATTCATCCCAACACGGAGGCTCTGCTTTTGACTCAACGGCGTCGTTTGAGTCCTCCACTTCCTTCACCTCCATGCCCCGTCATTATCATCAGCCCCGTGGCTCCTCCGTTGGAAGCTCCGGCACGGTGTCGAGCTCCTTGGACGTGGGGCTTGAGCCGAGATTGAATGGGAACTCCGTTGAAGAACAACAACAAGAATGCTCTGTATCTGTGAAATTCAAAAGGAGCTTATCTGATCACAAAATCGGGTCTTTGATAAAGCCCAGTAATAGGTTGAAGAAGATTTTTCGGCGAGCAATTTCCAGCGTCACACCAATCAAAGGGGTGGTTTCGATCGGAGAGCCCACTTCAGAGAAGCAAAAAAACAATGAAGATGAGATCGAAAATGATGAAGGTTCTGCAGTGCAAAGTTTGAATTTTCAGTGGGCTCAAGGAAGAGCAGGGGAAGATAGAATTCATATTGTGATTTCAGAGGATGATGGTTGGGTTTTCGTTGGAATCTATGATGGATTTAATGGCCCAGATGCCACTGATTACCTTCTGAACAATCTCTTTTGGTCTATTCACACTGAATTAAAGGAGATGCTCAGTAATGGCAATTCAGAATCAACAAATGAAGAATGTTTGAGTCATTCTGATGTGGTAAGAGCACTTTCAGAGGCATTAAGGAAAACAGAGGACGAATTTATGAAGGATTCTGATGAGACAATAACGAAGGATCCAGTGCTGGCCATGATGGGTTCTTGTGTTTTGGTGGTGTTAATGAAAGGAGATGATGTTTACGTAATGAATGTTGGGGATAGTCGAGCAGTTTTAGCTCAGAGTTCAGAGCATGGTTTGAATTCTCTTCAACTCACTGTAGATCACAGCACAAACGTGAAAAAGGAGGTTCAGAGAATAAGGAGGGAACACCCAGACGATCCTTGTGCAGTAATTAAAGGCAGAGTGAAAGGCCACTTGAACGTCACAAGGGCTTTTGGGGCTGGTTTCCTCAAGCAGCCTAAATACAACAATGCAGTATTAGAAGCATTCAGAGTTGACTATAAAGGGGATTCACCCTACATCACATGTTCACCTTCACTTAAGCACCACACTCTGAGCCCAAGTGACAGATTCTTGATAGTGTCCTCTGATGGACTTTACCAATACTTCACCAATGAAGAGGCAGTCTGCAGAGTTGAGTTTTTCATCACTTTGTATCCGGAAAGAGATCCTGCACAGCTTCTCATTGAAGAAGCTTTGGCTAGAGCAGCAACAAAAGCTGGTATGGATTTTTATGAATTACTGGAAATCCCTCAAGGAGAACGACGTTTGTTTCATGATGATATTTCCATTGTCATCATCTCCTTGGAGGGCAAAATATGGCGCTCATCAGCCTCATATACAGAAACTGCTTTGTGA 1662 0.4489 MGNGIGKICLCSSGVGDISRRYEMLPSNPYEKSLGNSISYTRPDPFRLSSCSNISSNEDSTTQMTFRSISGASVSANSSTPPSIYLANSSQHGGSAFDSTASFESSTSFTSMPRHYHQPRGSSVGSSGTVSSSLDVGLEPRLNGNSVEEQQQECSVSVKFKRSLSDHKIGSLIKPSNRLKKIFRRAISSVTPIKGVVSIGEPTSEKQKNNEDEIENDEGSAVQSLNFQWAQGRAGEDRIHIVISEDDGWVFVGIYDGFNGPDATDYLLNNLFWSIHTELKEMLSNGNSESTNEECLSHSDVVRALSEALRKTEDEFMKDSDETITKDPVLAMMGSCVLVVLMKGDDVYVMNVGDSRAVLAQSSEHGLNSLQLTVDHSTNVKKEVQRIRREHPDDPCAVIKGRVKGHLNVTRAFGAGFLKQPKYNNAVLEAFRVDYKGDSPYITCSPSLKHHTLSPSDRFLIVSSDGLYQYFTNEEAVCRVEFFITLYPERDPAQLLIEEALARAATKAGMDFYELLEIPQGERRLFHDDISIVIISLEGKIWRSSASYTETAL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2023 553 SUPERFAMILY PP2C-like 233 538 IPR036457 -
Alju11g2023 553 MobiDBLite consensus disorder prediction 109 150 - -
Alju11g2023 553 Pfam Protein phosphatase 2C 244 507 IPR001932 -
Alju11g2023 553 SMART PP2C_4 220 535 IPR001932 -
Alju11g2023 553 CDD PP2Cc 234 537 IPR001932 -
Alju11g2023 553 Gene3D - 201 545 IPR036457 -
Alju11g2023 553 ProSiteProfiles PPM-type phosphatase domain profile. 219 537 IPR001932 -
Alju11g2023 553 PANTHER PROTEIN PHOSPHATASE 2C 208 535 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2023 Alju-ChrAlju11 41675048 41677276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2023 1 544 PP2C-type Phosphatase Gene Family AT2G28890 46.177 1.06e-174 507