Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2012 ATGGGTGATCCGTACCCTTATGGGCTTCTCGATTTCCAGCAACTCATAGCAGGAAAAACACACCATGATCATTTTCCGGAGCCACCGTGTGTGGGCGGTGGTAGTGCTACTTCTGGTGCTGTTACTCCACTGCTACCTAATAACTACAACGACGTCCTTTTCTCTCATGGTTTTGATACTACCACCTTTGCTCCTTCAAACCCTACTGTTACTACTGCTTCTGCTTTAGAAAAGGGATGGGTTGGAATTGATGACATGGCCAACAACAATAGATGGCCAAGACAAGAGACTCTTTTGCTCTTAGAGATCAGATCTCGTCTTGATTCTAAGTTCAAAGAGACCAATTACAAAGCCCCCTTATGGAATCAAATTTCTAGGATAATGAGTGAAGAATATGGGTACCAGAGAAGTGGGAAAAAATGTAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAGGACCAAGGAAGGGAAAGCAGGTAGACAAGACGGTAAACACTACAGATTCTTTCGTCAGCTTGAAGCAATATGTGGAGAATCATCATCAACAACAACAACGAACAATATTACTACTACTTCTGCTAATTATTACCAACCTCCATTAATGACCTTCACATCAGATGGTGAAAAAGTTCTTCATCACAACAACAACATCAATAAGTACTGCTCAAAGAGCCTGATCAGTCTGTCAAACAACTCAGCATCAGATCATCAGTTTGAGGCATTCTCGTATGAAAATAACAATGATGACATCAAGGACATGTCAGCAGTGACCTATATGATGATGAAGCAGAAAGAGGTGGAGATGGACCAGAAAAGAGAAAGTGGAATGAGGAAGAGATGGAGAGTTGAGGTCGAAGAAATTGTGGAGTGTCACATGAAGAAGATGATAGAGAGTCAAGAGGCTTGGATGGAGAAGATGATGAGTGTGGTTGAGCAAAGAGAGCAAGAAATGGTTTATCAGGAAGAAGAGAGGACGGGAGGAGATTCAATAAGATTCGATCAACAGGTGCATCAACTGTGGGCTAAAGAGAAATCTTAG 1044 0.4148 MGDPYPYGLLDFQQLIAGKTHHDHFPEPPCVGGGSATSGAVTPLLPNNYNDVLFSHGFDTTTFAPSNPTVTTASALEKGWVGIDDMANNNRWPRQETLLLLEIRSRLDSKFKETNYKAPLWNQISRIMSEEYGYQRSGKKCKEKFENLYKYYKRTKEGKAGRQDGKHYRFFRQLEAICGESSSTTTTNNITTTSANYYQPPLMTFTSDGEKVLHHNNNINKYCSKSLISLSNNSASDHQFEAFSYENNNDDIKDMSAVTYMMMKQKEVEMDQKRESGMRKRWRVEVEEIVECHMKKMIESQEAWMEKMMSVVEQREQEMVYQEEERTGGDSIRFDQQVHQLWAKEKS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2012 347 CDD GT1 90 156 - -
Alju11g2012 347 PANTHER FI21293P1 84 346 - -
Alju11g2012 347 FunFam Trihelix transcription factor GT-2 92 154 - -
Alju11g2012 347 ProSiteProfiles Myb-like domain profile. 84 149 IPR001005 -
Alju11g2012 347 Gene3D - 92 154 - -
Alju11g2012 347 Pfam Myb/SANT-like DNA-binding domain 90 177 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2012 Alju-ChrAlju11 41493603 41495889 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2012 91 347 Trihelix Transcription Factor Family AT5G03680 45.525 2.57e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju11g2012 Myb_DNA-bind_4 2.3e-19 CL0123